Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2701 |
Symbol | |
ID | 8088388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 3156338 |
End bp | 3157522 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644836773 |
Product | nucleoside transporter |
Protein accession | YP_002988300 |
Protein GI | 242240119 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1972] Nucleoside permease |
TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0555199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAATA TCCTTCACTT CGTTCTGGCC TTAGCTGTTG TTGCCGCCTT GTCGCTACTG GTGTGTCGTG ACAAAAAAGG TATTCGTGTC AGATTCATTA TTCAGTTACT CGTTATTGAA ATTCTATTAG CGTATTTTTT CCTCTATTCC AACGTAGGCT TGGGTTTTGT AAAAGGCTTC GCATCGCTGT TTGACAAACT GCTCAGCTTT GCCGGCGAAG GCACCAACTT CGTCTTCGGT AAAATGAGTG ATCAGGGATT GGCGTTCTTT TTCCTGAAAG TGCTATGCCC CATCGTATTC ATCTCCGCGC TGATCGGCAT CCTGCAACAC ATCAAGGTTC TGCCGTTTAT CATTCGTCTG ATCGGAACCA TCCTGTCCAA AGTCAACGGC ATGGGAAAAC TGGAATCCTT TAACGCCGTC AGCTCGTTGA TCCTTGGCCA GTCTGAAAAC TTCATTGCTT ACAAAGATAT ACTGGGCAAG ATGTCGGAAA AACGGATGTA CACCATGGCA GCAACCGCCA TGTCAACCGT CTCCATGTCC ATCGTGGGCG CCTACATGTC GATGCTGGAT GCCAAATACG TAGTTGCGGC GCTGGTACTC AACATGTTCA GCACCTTTGT CGTGCTTTCG CTGATCAACC CCTACCGTGT GGACGAAGAA CAGGAATTGC AATTAAGCAA CCTACATGAA GGTCAGAGCT TCTTTGAAAT GCTGGGGGAA TACATTCTTG CCGGTTTCAA AGTGGCGATT ATCGTCGCTG CTATGCTAAT CGGCTTTATC GCGCTGATTT CCGCTGTCAA CGCCCTGTTC AGCACCATTC TTGGGCTGAG CTTCCAGGAA CTATTGGGCT ACGTCTTCTA TCCGTTTGCC TGGATCGTCG GCATTCCCAA AGAGGAAGCA TTACAGGTAG GCGGCATTAT GGCCACCAAG CTGGTTTCCA ACGAATTTGT CGCCATGATG GAACTGCAAA AAGTAGCAGG CCAACTGTCT CCGCGCAGCG TGGGTATTCT GTCCGTTTTC TTGGTGTCTT TTGCTAACTT CTCATCGATC GGTATTGTTG CCGGCGCCAT CAAAGGCCTT GATGAAAAAC AGGGTAATAC CGTTTCCCGT TTCGGTCTGA AACTGGTGTA TGGCTCCACG CTGGTGAGCT TGCTCTCCGC CGCTATTGCC GGTCTGGTAC TGTAA
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Protein sequence | MSNILHFVLA LAVVAALSLL VCRDKKGIRV RFIIQLLVIE ILLAYFFLYS NVGLGFVKGF ASLFDKLLSF AGEGTNFVFG KMSDQGLAFF FLKVLCPIVF ISALIGILQH IKVLPFIIRL IGTILSKVNG MGKLESFNAV SSLILGQSEN FIAYKDILGK MSEKRMYTMA ATAMSTVSMS IVGAYMSMLD AKYVVAALVL NMFSTFVVLS LINPYRVDEE QELQLSNLHE GQSFFEMLGE YILAGFKVAI IVAAMLIGFI ALISAVNALF STILGLSFQE LLGYVFYPFA WIVGIPKEEA LQVGGIMATK LVSNEFVAMM ELQKVAGQLS PRSVGILSVF LVSFANFSSI GIVAGAIKGL DEKQGNTVSR FGLKLVYGST LVSLLSAAIA GLVL
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