Gene Dd703_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2701 
Symbol 
ID8088388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3156338 
End bp3157522 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content49% 
IMG OID644836773 
Productnucleoside transporter 
Protein accessionYP_002988300 
Protein GI242240119 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0555199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAATA TCCTTCACTT CGTTCTGGCC TTAGCTGTTG TTGCCGCCTT GTCGCTACTG 
GTGTGTCGTG ACAAAAAAGG TATTCGTGTC AGATTCATTA TTCAGTTACT CGTTATTGAA
ATTCTATTAG CGTATTTTTT CCTCTATTCC AACGTAGGCT TGGGTTTTGT AAAAGGCTTC
GCATCGCTGT TTGACAAACT GCTCAGCTTT GCCGGCGAAG GCACCAACTT CGTCTTCGGT
AAAATGAGTG ATCAGGGATT GGCGTTCTTT TTCCTGAAAG TGCTATGCCC CATCGTATTC
ATCTCCGCGC TGATCGGCAT CCTGCAACAC ATCAAGGTTC TGCCGTTTAT CATTCGTCTG
ATCGGAACCA TCCTGTCCAA AGTCAACGGC ATGGGAAAAC TGGAATCCTT TAACGCCGTC
AGCTCGTTGA TCCTTGGCCA GTCTGAAAAC TTCATTGCTT ACAAAGATAT ACTGGGCAAG
ATGTCGGAAA AACGGATGTA CACCATGGCA GCAACCGCCA TGTCAACCGT CTCCATGTCC
ATCGTGGGCG CCTACATGTC GATGCTGGAT GCCAAATACG TAGTTGCGGC GCTGGTACTC
AACATGTTCA GCACCTTTGT CGTGCTTTCG CTGATCAACC CCTACCGTGT GGACGAAGAA
CAGGAATTGC AATTAAGCAA CCTACATGAA GGTCAGAGCT TCTTTGAAAT GCTGGGGGAA
TACATTCTTG CCGGTTTCAA AGTGGCGATT ATCGTCGCTG CTATGCTAAT CGGCTTTATC
GCGCTGATTT CCGCTGTCAA CGCCCTGTTC AGCACCATTC TTGGGCTGAG CTTCCAGGAA
CTATTGGGCT ACGTCTTCTA TCCGTTTGCC TGGATCGTCG GCATTCCCAA AGAGGAAGCA
TTACAGGTAG GCGGCATTAT GGCCACCAAG CTGGTTTCCA ACGAATTTGT CGCCATGATG
GAACTGCAAA AAGTAGCAGG CCAACTGTCT CCGCGCAGCG TGGGTATTCT GTCCGTTTTC
TTGGTGTCTT TTGCTAACTT CTCATCGATC GGTATTGTTG CCGGCGCCAT CAAAGGCCTT
GATGAAAAAC AGGGTAATAC CGTTTCCCGT TTCGGTCTGA AACTGGTGTA TGGCTCCACG
CTGGTGAGCT TGCTCTCCGC CGCTATTGCC GGTCTGGTAC TGTAA
 
Protein sequence
MSNILHFVLA LAVVAALSLL VCRDKKGIRV RFIIQLLVIE ILLAYFFLYS NVGLGFVKGF 
ASLFDKLLSF AGEGTNFVFG KMSDQGLAFF FLKVLCPIVF ISALIGILQH IKVLPFIIRL
IGTILSKVNG MGKLESFNAV SSLILGQSEN FIAYKDILGK MSEKRMYTMA ATAMSTVSMS
IVGAYMSMLD AKYVVAALVL NMFSTFVVLS LINPYRVDEE QELQLSNLHE GQSFFEMLGE
YILAGFKVAI IVAAMLIGFI ALISAVNALF STILGLSFQE LLGYVFYPFA WIVGIPKEEA
LQVGGIMATK LVSNEFVAMM ELQKVAGQLS PRSVGILSVF LVSFANFSSI GIVAGAIKGL
DEKQGNTVSR FGLKLVYGST LVSLLSAAIA GLVL