| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2628 |
|---|
| Symbol | |
|---|
| ID | 8088314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 3076713 |
|---|
| End bp | 3077717 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644836699 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_002988227 |
|---|
| Protein GI | 242240046 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.607562 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATG CGAATCCTGA GCCGGTGCTG CATCTGCGTG ATTTGCAGGT GCGGTTTAAC
GGCTCGCCGG TCACGGTGCT GGACGGCATC AGCCTGACAT TACAAGCGGG CGAAACGCTG
GCGCTGGTCG GGGAATCCGG CTGCGGCAAG AGCATTACCT CGCTGGCATT GATGGGGTTG
TTGCCGCCCG GCGCGCGTAT TGTCGGCGGC GAGATGCGTT TTGGCGAGCA TGACTTGCGC
GCGCTGTCGC CCCGCCAGTA CGCGGATCTG CGCGGCAACC GGCTGGCGAT GGTGTTTCAG
GAGCCGATGA CCTCGCTGAA CCCGGCGTTC ACGCTGGGCG ACCAGCTTGC CGAAGCGGTG
ATGCGCCACC GCCCGATGCG GCGGGAGGCG GCGTTGCACG CGGCGCTGGC GATGCTGGAG
AAGGTGCAGA TCCCGGCGGC GGCGATGCGT CTGCGCGCCT GGCCGCACCA GCTTTCCGGC
GGGATGCGCC AGCGGGTGAT GATCGCCATG GCGCTGATTA ACCAACCGTC GCTGCTGATC
GCCGACGAGC CCACCACCGC GCTGGATGTC ACCATTCAGG CGCAGATACT CACGCTGCTC
AATCAGTTAC AACAGGATAC CGGCGCCGCG GTGCTGATGA TTACCCACGA TCTGGGCGTG
GTGGCGGAAG TGGCGCAGCG CGTGGCGGTG ATGTACGCCG GGCAGGTGGT GGAAACCGGC
GACGTCGCGG CGATTTTCAA CGATCCGCAG CACCCGTACA CCATCGGGCT GATGGGGGCG
ATCCCAAGCC TGGGTCAACG CCAACAGGCG CTGGCCACCA TTCCCGGGCA GGTGCCGCTG
CCGGAGGCGA TGCCGGCCGG GTGTCGCTTC GCCACCCGTT GCCCGTTCGT GCAACCGCAG
TGCCATCATC ACAAGCCGCC GTTGCAGGAT CTGGGCGACC AACACCTCGT CGCCTGTTTT
CGCGTACCGC TGGAGCAGCA TGTCGCGCTG GAGGCGATTG CATGA
|
|---|
| Protein sequence | MTHANPEPVL HLRDLQVRFN GSPVTVLDGI SLTLQAGETL ALVGESGCGK SITSLALMGL
LPPGARIVGG EMRFGEHDLR ALSPRQYADL RGNRLAMVFQ EPMTSLNPAF TLGDQLAEAV
MRHRPMRREA ALHAALAMLE KVQIPAAAMR LRAWPHQLSG GMRQRVMIAM ALINQPSLLI
ADEPTTALDV TIQAQILTLL NQLQQDTGAA VLMITHDLGV VAEVAQRVAV MYAGQVVETG
DVAAIFNDPQ HPYTIGLMGA IPSLGQRQQA LATIPGQVPL PEAMPAGCRF ATRCPFVQPQ
CHHHKPPLQD LGDQHLVACF RVPLEQHVAL EAIA
|
|---|
| |