Gene Dd703_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2601 
Symbol 
ID8086991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp3049425 
End bp3051047 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content53% 
IMG OID644836671 
Productmalate:quinone oxidoreductase 
Protein accessionYP_002988200 
Protein GI242240019 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID[TIGR01320] malate:quinone-oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0636269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATC TATTGGTCAC CACGGCGGCG CAGTCAGCAT CAGTGAACGA GGATGTCACG 
AAGGATGTCG TGCTGATTGG CGGTGGTGTC ATGAGTGCTA CGCTGGGGAC ATATTTGCAG
GCTTTGGAGC CTGGCTGGTC CATCAGCATG ATCGAGCGTC TGGGCAGCGT GGCGGAAGAA
AGCTCCAACG GTTGGAATAA CGCGGGAACT GGGCATGCGG CATTTCTGGA GCTGAATTAC
ACTCCGGAGA AGGCCGACGG TTCGATTGAT ATCAGTAAAG CAGTGAATAT CAGCGAAGCG
TTTGAAGTTT CTCTGCAATT TTGGGCGTAT CAGGTGGCGA ATAACGTTAT AGGCGATCCG
TCCACCTTCA TCCATAGCGT GCCGCACATG AGCTTTGTGT GGGGCGATGA AAACGTGAAT
TTCCTGCGTC GCCGCTATAA AGCGTTGCAG CACAACACAT TGTTTCAGGG GATGGAGTAT
TCCGAAAACC CTGAACGCAT CAAACAGTGC ATTCCATTGG TGATGGAAGG GCGCGATACC
CGGCAGAAGG TCGCCATGAC CCGCATGCCC ATCGGCACCG ATGTTGATTT TGGTGAAGTT
ACCCGTCAAC TGGTCGTCGG AATGCAGAAA AACCCTCATT TCACGCTGTG GCAGGAACAT
GATGTTCGCG ATATCCGTCG CAATCAGGAC GGCACCTGGA GCGTGGTGAC TGCCGATCTG
AACGATGGCG GCAAAGAGCG TATTGTTCGG GCGCGGTTCG TGTTCATCGG CGCTGGCGGG
GCTGCATTAC CCTTGCTGCA GAAATCCGGT ATTCCTGAGG CCAGCCAGTA TGGCGGTTTC
CCGGTTGGCG GTGAGTTTCT GGTGACTGAT AACCCTGACG TGGTGAAACG CCATCAGGCT
AAGGTGTATG GCAAGGCGTC GGTTGGCGCT CCACCCATGT CGGTGCCGCA TCTGGATTCA
CGCATGCTGG GCGGCAAGCC AGCCTTATTG TTCGGTCCGT TCGCTTCTTT CTCCAGTAAA
TTTTTGAAGA ATGGCTCGTT GTGGGATCTG TTTTCTTCGG TGAACACCGC AAATGTTTTA
CCCATGATGC GGGTGGGGCT GGATAATTTC GATCTGGTGA AATATCTCGT TAGCCAGGTG
ATGATGAGCG AAAACGATCG CTTTGCCGAA CTGAAAAATT ATTTTCCGGA TGCCAGAAAA
GAAGACTGGC GGCTGGCGAC GGCAGGGCAG CGCGTGCAGG TGATCAAAAA AGACAAACAG
AAGGGTGGCG TGCTGAAGAT GGGCACTGAA GTCGTCGCCT CGCAGGACGG TACGATTGCC
GCGCTGCTGG GGGCTTCTCC CGGAGCTTCA ACCGCTGCAA CCATCATGAT TGAGCTGATG
CAGGTTGCCT TCAAGGATAA GATGGCTTCG GTGGAATGGC AGGTGCGCCT GAAAGAAATC
ATTCCTTCCT GGGGACAGAA GCTGAACGGC AATGTTGAGC TGACCAATGA GATTCGTCGT
TATACCAGCA GTACGTTGAA GCTGCGGTAT ATGGACGTGA AAGCGGAGTC GGAATTAAGA
TCCCAGTTGG AAGAGGCTCC GGAACATGAG ATTCAGGTGG ATCAGATTGT TCCAGTGATG
TAA
 
Protein sequence
MKNLLVTTAA QSASVNEDVT KDVVLIGGGV MSATLGTYLQ ALEPGWSISM IERLGSVAEE 
SSNGWNNAGT GHAAFLELNY TPEKADGSID ISKAVNISEA FEVSLQFWAY QVANNVIGDP
STFIHSVPHM SFVWGDENVN FLRRRYKALQ HNTLFQGMEY SENPERIKQC IPLVMEGRDT
RQKVAMTRMP IGTDVDFGEV TRQLVVGMQK NPHFTLWQEH DVRDIRRNQD GTWSVVTADL
NDGGKERIVR ARFVFIGAGG AALPLLQKSG IPEASQYGGF PVGGEFLVTD NPDVVKRHQA
KVYGKASVGA PPMSVPHLDS RMLGGKPALL FGPFASFSSK FLKNGSLWDL FSSVNTANVL
PMMRVGLDNF DLVKYLVSQV MMSENDRFAE LKNYFPDARK EDWRLATAGQ RVQVIKKDKQ
KGGVLKMGTE VVASQDGTIA ALLGASPGAS TAATIMIELM QVAFKDKMAS VEWQVRLKEI
IPSWGQKLNG NVELTNEIRR YTSSTLKLRY MDVKAESELR SQLEEAPEHE IQVDQIVPVM