| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2494 |
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| Symbol | |
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| ID | 8086884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 2922662 |
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| End bp | 2926783 |
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| Gene Length | 4122 bp |
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| Protein Length | 1373 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644836566 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_002988095 |
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| Protein GI | 242239914 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit
[TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.204618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTC GTCTGGTGAT TATCGGCAAC GGCATGGCCA GCGCCCGTCT GGTGCGGCGT
TTAGCGGAGC TGGCGCCCCG GATCTACCAC GTTGTGGTTA TCGACAGTGA GCCGCGCGCC
AGTTATAACC GCGTACTGCT CTCCCCGGTA CTTGGCGGGG AAAAAACGTT CGCCGATACC
GTGCTGGCAT CGCCTTCGCC AGCGCTGCGG GTGGACTACC TGACCGGCGA GAAAGTGCTG
CGCATCGATC GTTGCGCCCG CGAACTGACG ACAGAACGTC GTCGCCTGCG CTACGACCAT
CTGGTGATCG CCACCGGTTC ACGACCTTTC ATGCCGCCGC TGCCGGGCAT CGATCTGCCG
GGCGTGCTGG GCTTTCGCAC GCTGGATGAT GTGGAACAGA TGCTGACGGC GGTACGTCAG
GGGCGCCCCG TGGCGGTGAT CGGCGGCGGC CTGCTGGGGA TCGAGGCCGC GGCGGCGTTG
CGTCAGCGCG GCGCCGACGT CACCTTGCTG CATCGTCATC CGCACCTGAT GGAGCGCCAG
TTGGACGGCG CCGCCAGCGC GTTGTTGCAG GAGAACCTCG CGGCGCGCGG GATCCGCTGT
CTGACCGGCG TACAGGTTTC GGCACTGGCG GGAACCGCGC AGGTGGACGC GGTCGTGTTG
GCGCAGGGAG AGCGCGTTTC AGCCGGTCTG GTGGTGATCG CCACGGGGGT GCAACCCGTG
GTTGAGCTGG CGCGGGACGC CGGTTTGCCG TGTGGTCGCG GCATTCTGGC GGATGGCCAG
CTGCGCACGG TGGATGACGC CGTCAGCGCG CTGGGGGAGT GCAGTGAAGT GAACGGCGAA
ACCGTTGGTC TGGTGGCGCC CTGTCTGGCG CAGGCGCAGG TATTGGCGCA CCGGCTGGCA
GGACAGCCGA TCGCCGACTA TGTGCCGACG CCGTTGGCGA CCCGTCTCAA AGTGAGCGGG
GTGGATGTGG TCAGCGCCGG TACGCTGGAG CCGCAGGCCG CCGATCGTCA ATACACCCTT
TCCGACCCGC TTAGCGGTCA CTACCGCCGA CTGATTTTCC GCGATGGCCG CCTGTGCGGC
GCATTGCTGT ATGGCTATGT CGGCGATAGC GCGTCGTTGT TGTCGGCCAT GGAGTCCGAC
AACGTTCCGG TTCCCGCCTC GTTGCTGCTG GCAAGCCCTT TTTCTGATGA ACAGCCTGAA
GCTGTAAGGA CGTCTGTGAT GAACAAACCC GTATTGGTGG TGATTGGACA CGGTATGGTC
GGACACCATT TTCTTGAGCA ACTGGTGGAA CGCAACCTGC ACCGGGATTA CCACATTGTG
GTGTTTGGCG AAGAACGCCA CCCCGCGTAT GACCGGGTTC ATCTGTCGGA ATATTTTGCC
GGACGCAGCG CCGCATCGCT GTCGATGGTC AGCGCCGGAT TTTTCGAGCA GCACGACATT
GAACTGCGCA CCGGTTGCGC CGTAGCGGCG ATTGATCGGC AGCGCCGCTG CGTGCGTGAC
GCCGCCGGTC GTGAGACCGC CTACGATCGG CTGGTGCTGG CGACCGGTTC TTATCCGTTC
GTCCCGCCGA TTGACGGCAG CGATCATCCC GGCTGTCTGG TTTATCGCAC GCTGGATGAT
CTCGACGCCA TCGCCGCGCA GGCGCGTGAA GCCCGTAGCG GCGTGGTGAT CGGCGGCGGC
CTGCTGGGGC TGGAAGCCGC CAACGCGCTG CGTCAGCTCG GGCTGGAAAC CCATGTGGTG
GAATTCGCGC CGCGCCTGAT GGCGGTACAG CTGGACGACG GCGGCGCGGC ATTGCTGAAG
CGCAAGATTG AAGCACTGGG CGTGCGGGTG CACACCGGCA AAGAAACCCG CGCGATACAG
ACCGGGGAAC AGGCTCGCTA TCGGCTGGCG TTTGCCGACG GCAGCCAGCT TGAAACGGAC
ATGGTGTTGT TCTCCGCCGG TATTCGGCCG CAGGATCGGC TGGCGCGTGA CGCCGGGTTG
ACGCTTGGCC CGCGCGGCGG CGTGTTGATT GACGATCGCT GTTGCAGCTC CGACGCGGAT
ATTTTCGCCA TCGGCGAGTG CGCGCTGTGG CAGGGGCAGA TCTTCGGCCT GGTGGCGCCG
GGCTATCAGA TGGCGCGTGT CGTGGCGGAT GGGCTGGCGG GCCGGACGAG CGCGTTTACC
GGCGCGGACA TGAGCACCAA GCTCAAGCTA CTGGGGGTGG AGGTGGCGTC CATCGGCGAC
GCCCACGGCG CGACGCCGGA CAGCCAGAGT TACCAGTGGA ACGACGGCCC GCGGGAGGTT
TACAAGAAAA TCATCGTCTC GGCGGACGGG AAACGGCTGC TGGGGGCGGT TCTGGTGGGC
GACAGCAGTG ATTACAGCAC CCTGTTGCAG ATGAAACTCA ACGATATGCC GTTGCCCGCG
CAGCCGGCGT CGCTGATCCT GCCGGCGCTG GACGGCGCGG CGCCGAAAGC GCTCGGGGTA
GCGGCGTTGC CGGACAGCGC CCAAATCTGC TCCTGCCATA ACGTCACCAA GGCGGATATC
TGCGCCGCGG TGGACGCGGG TTGCACCGAT CTGGCGTCGT TAAAAGCCTG TACCAAGGCG
GGCACCGGCT GCGGCGGTTG TGTGCCGCTG CTCAAGCAAG TGATGGAGTA CCAGCTTGCG
CAATCCGGTA TTGAAGTGAA AAAGGATGTC TGCGAGCACT TCGCCTATTC GCGACAGGAA
CTGTATCACC TGATCCGCGT GCACCAGATT CGCAGTTTTG ACCAATTGCT GGCTCGATTC
GGGCAGGGGT TGGGCTGTGA AATCTGTAAG CCGCTGGCGG GCTCCATGCT GGCATCCTGC
TGGAACGATT ATGTGCTCAG CCCGGATCAT CTGCCGTTGC AGGACACCAA CGATCGCTTC
CTGGCCAATA TTCAAAAAGA CGGTACCTAT TCGGTGGTGC CGCGCGTGCC CGGCGGCGAA
ATCACCCCGC AGGGGTTGAT CGCCATCGGT GAGGTGGCGC AGCGCTATCA GCTTTACACC
AAGATCACCG GCGGGCAACG TGTCGATTTG TTCGGCGCAC GGCTGGAACA GCTGCCGGAT
ATCTGGCAGA CGCTGATCGA CGCCGGGTTT GAAACCGGCC ACGCCTACGG CAAGTCGTTG
CGCACGGTGA AATCCTGCGT CGGCTCGACC TGGTGCCGCT ACGGCGTGCA GGATTCCACC
ACGCTGGCGA TTGCGCTGGA GCACCGCTAC AAAGGCCTGC GCTCGCCGCA CAAAATTAAA
ATGGCGGTTT CCGGCTGTAC CCGCGAGTGC GCGGAAGCGC AGGGCAAGGA TATCGGCGTC
ATCGCCACCG ACAAGGGCTG GAATCTGTAC GTGTGCGGCA ACGGCGGCAT GAAACCGCGT
CATGCCGACC TGTTCGCCAG CGATCTGGAT ACCGCCATGC TGATCCGGCT AATCGACCGG
GTGCTGATGT TCTATATCCG CACCGGCGAC CGGCTGCAAC GCACCAGTAC CTGGCTGGAT
AATCTGGAAG GCGGCATCGA CTACCTGCGG GCGGTGATCA TCGACGATAG CCTCGGTATC
GCGTCGGAGC TGGAAAGCGA GATGCAGCAG GTGGTCGACA GCTATCAGTG CGAATGGCGC
ACCACCGTGA CGCAACCGGA TCGTCGGGCG CTGTTTCGCG CCTTTCTCAA CAGCGATACG
CCGGACGAAT CGGTGGTCAT GGTCTCGGAG CGGCATCAGC CGCGTCCCGC CACCGCAGAG
GAAAAAACCG TATCGGCGAT GCCGCAGGAT GTCCCTGCCG CCAGTTGGCT GCGGGTCGGG
CGCCTGAGCG ATATCCCGGC GCACACCGGC ATGGCGGTAC GTGTCGGCGG GCATCAGGTT
GCCGTATTCC ATGTGCCGGG ACAGGATGCC AGGCTGTTTG CGCTGGATAA TCTGGAGCCG
GCCAGTCGCG CCAATGTGCT GGCGCGCGGT ATCGTCGGCG ACACTGCGGG CGAACCGGTG
GTGATTTCGC CGCTGTACAA ACAGCGTTTT CGCTTACGTG ACGGCGTCAG CCCGGATGAT
GACCGCCTGG CGGTGCAGGT GTGGCCGGTA CGCCTTGAAC AGGATGACAT CTGGGTAGCG
AGCCAGCCGC TGGGCGTGAC CGTGCTGGCG GAGGCATTAT GA
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| Protein sequence | MSIRLVIIGN GMASARLVRR LAELAPRIYH VVVIDSEPRA SYNRVLLSPV LGGEKTFADT
VLASPSPALR VDYLTGEKVL RIDRCARELT TERRRLRYDH LVIATGSRPF MPPLPGIDLP
GVLGFRTLDD VEQMLTAVRQ GRPVAVIGGG LLGIEAAAAL RQRGADVTLL HRHPHLMERQ
LDGAASALLQ ENLAARGIRC LTGVQVSALA GTAQVDAVVL AQGERVSAGL VVIATGVQPV
VELARDAGLP CGRGILADGQ LRTVDDAVSA LGECSEVNGE TVGLVAPCLA QAQVLAHRLA
GQPIADYVPT PLATRLKVSG VDVVSAGTLE PQAADRQYTL SDPLSGHYRR LIFRDGRLCG
ALLYGYVGDS ASLLSAMESD NVPVPASLLL ASPFSDEQPE AVRTSVMNKP VLVVIGHGMV
GHHFLEQLVE RNLHRDYHIV VFGEERHPAY DRVHLSEYFA GRSAASLSMV SAGFFEQHDI
ELRTGCAVAA IDRQRRCVRD AAGRETAYDR LVLATGSYPF VPPIDGSDHP GCLVYRTLDD
LDAIAAQARE ARSGVVIGGG LLGLEAANAL RQLGLETHVV EFAPRLMAVQ LDDGGAALLK
RKIEALGVRV HTGKETRAIQ TGEQARYRLA FADGSQLETD MVLFSAGIRP QDRLARDAGL
TLGPRGGVLI DDRCCSSDAD IFAIGECALW QGQIFGLVAP GYQMARVVAD GLAGRTSAFT
GADMSTKLKL LGVEVASIGD AHGATPDSQS YQWNDGPREV YKKIIVSADG KRLLGAVLVG
DSSDYSTLLQ MKLNDMPLPA QPASLILPAL DGAAPKALGV AALPDSAQIC SCHNVTKADI
CAAVDAGCTD LASLKACTKA GTGCGGCVPL LKQVMEYQLA QSGIEVKKDV CEHFAYSRQE
LYHLIRVHQI RSFDQLLARF GQGLGCEICK PLAGSMLASC WNDYVLSPDH LPLQDTNDRF
LANIQKDGTY SVVPRVPGGE ITPQGLIAIG EVAQRYQLYT KITGGQRVDL FGARLEQLPD
IWQTLIDAGF ETGHAYGKSL RTVKSCVGST WCRYGVQDST TLAIALEHRY KGLRSPHKIK
MAVSGCTREC AEAQGKDIGV IATDKGWNLY VCGNGGMKPR HADLFASDLD TAMLIRLIDR
VLMFYIRTGD RLQRTSTWLD NLEGGIDYLR AVIIDDSLGI ASELESEMQQ VVDSYQCEWR
TTVTQPDRRA LFRAFLNSDT PDESVVMVSE RHQPRPATAE EKTVSAMPQD VPAASWLRVG
RLSDIPAHTG MAVRVGGHQV AVFHVPGQDA RLFALDNLEP ASRANVLARG IVGDTAGEPV
VISPLYKQRF RLRDGVSPDD DRLAVQVWPV RLEQDDIWVA SQPLGVTVLA EAL
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