Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2402 |
Symbol | |
ID | 8086790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2818268 |
End bp | 2820577 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644836475 |
Product | glycoside hydrolase family 3 domain protein |
Protein accession | YP_002988006 |
Protein GI | 242239825 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.452314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATGGC TTACTTCACT GACGCTTGCT GTCGGTTTGG CATGCAGCCC GGTCTGGGCG AACCATGTCG ATAGCACGCC GCCGGCGGCC ACGCTGACAT CCCAACAACA GCGCGATGCC TTCGTTAATG ATCTGCTTAA CAAAATGACG CTGGAAGAAA AAATCGGGCA GTTACGGTTG ATCAGCGTCG GCCCGGACAA CCCGAAACAC GCGATCCGCG AAATGATTCG CAATGGACAA GTCGGTGGGA TTTTCAACAC CGTCACCCGT CCTGACATTC GGGTGATGCA GGATCAGGTG ATGCAGCTCA GTCGTCTGAA AATCCCGCTG TTTTTTGCTT ACGACGTGGT GCACGGTCAG CGCACCGTGT TCCCGATCGG GCTGGGTCTG GCCTCGTCCT GGGACATGGA TACAGTAGAA ACATCAGCAC GTATTGCGGC GTATGAAGCG ACGGAAGACG GCCTGAACAT GACCTGGGCG CCGATGGTGG ATATCACCCG CGATCCGCGT TGGGGTCGGG TATCCGAAGG GTTCGGCGAG GACACCTACC TCACCAGCGA AATCGCCCGG GTGATGGTAA AAGGTTTTCA AGGGGATGAC TTGACCGGTC GCCATTCCCT GATGACCAGC GTCAAGCACT TCGCGCTGTA CGGCGCGGCG GAAGGAGGAC GCGATTACAA CACCGTGGAC ATGAGCCCGC AGCGCATGTT CCAGGACTAT ATGCCGCCGT ACAAGGCGGC GATCGACGCC GGCAGTTACG GGGTGATGGC GTCGCTTAAT TCGATCAATG GCGTACCCGC TACCGCCAAC CGCTGGTTGC TGAAGGATGT TCTGCGCGAC CAGTGGCATT TTAAAGGCAT CACCATCAGC GATCACGGCG CCATCAAAGA GCTGATTAAA CACGGCGTCG CCGCCGACCC CAGCGATGCG GCGCGTATTG CCGTGCATGC GGGTATCGGC ATGAGTATGA GCGACGAGTA TTTCGAGCGT TATTTGCCGG ATCTGGTCAA GCGTGGCGTG GTCAATATTA AGGATATTGA AGATGCCTGC CGCCAGGTGC TGAACATGAA ATACGACATG GGGCTGTTTC AGGATCCGTA TCGCCATCTC GGCCCGGTCG GTTCCGATCC GCTGGATACC AATGCCGAAA GCCGCCTACA CCGCGCTGAA GCGCGTGACG TGGCGCGCCG TAGCCTGGTG CTGCTGAAAA ACCGTCTGAA TATTCTGCCG TTGGCGAAAT CCGGCACCAT TGCCGTCGTC GGGCCGCTGG CGGACAGCAA ACGCGACATT ATCGGCAGTT GGTCGGCCGC CGGGCGTCCG GCGCAGGCGG TGACGGTGTA CGAAGGGATC CGTAAGGCGG TGGGATATAA CGCCCGTGTT TATTACGCCA AGGGTTCCAA CGTCACCAAC CACCCCGGGT TAATTAAATT CCTGAACGAG TACGATGAAT CGGTCGTGGT GGATCCGCGC TCGCCGCAGG CGATGATCGA CGAAGCGGTG GACGCGGCGA AAAAATCCGA CGTGGTGATC GCCGTGGTGG GCGAATCCCA GGGGATGGCG CATGAAGCCT CCAGCCGCGC CAAAATCACC ATTCCGCCGG AGCAAAAGGC GCTGATTGCC GCGCTGAAAG CCACCGGCAA GCCACTGGTG CTGGTGCTGA TGAATGGCCG TCCGCTGGAT CTAAGCCGTG AAGATCAGCA GGCTAACGCC ATTCTGGAAA CCTGGTTCAG CGGCACCGAA GGGGGCAACG CCATCGCCGA TGTGCTGTTC GGCGACTACA ACCCGTCCGG CAAACTGCCG ATGACCTTCC CGCGCTCCGT CGGCCAGATC CCGATGTACT ACAACCAGCT ACCGACCGGG CGTCCGTATT CGGCGGAAGC GCCCAACAAG TACACTTCGC ACTACTTCGA CGAGGCCAAC GGGCCGCTGT ATCCGTTCGG TTATGGCCTG AGCTACACCA CGTTCGCGGT GTCGGACGTG GCGCTTTCGA GCCCGACCAT GAAACGCAAC GGCTCGGTGA ACGCCTCGGT GACAGTGACC AATACCGGCA AACGCGCCGG GGAGACGGTG GTTCAGCTCT ACCTGCACGA TGTGGTGGCG TCTGTCAGCC GTCCGGTGAA GGAGTTGCGC GGTTTCCGCA AGGTGATGTT ACAGCCAGGA GAAAGCCAGC AAGTCAACTT TACGATCACG CCGCAGGCGC TGATGTTCTA CAACCAGCAG ATGCAGCAGG TGGTAGAGCC CGGCCAGTTT GATGTGATGA TCGGGCTGGA TTCCCAGCGG GTGAAACACG GCAGCTTTAC GCTGCAATAA
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Protein sequence | MKWLTSLTLA VGLACSPVWA NHVDSTPPAA TLTSQQQRDA FVNDLLNKMT LEEKIGQLRL ISVGPDNPKH AIREMIRNGQ VGGIFNTVTR PDIRVMQDQV MQLSRLKIPL FFAYDVVHGQ RTVFPIGLGL ASSWDMDTVE TSARIAAYEA TEDGLNMTWA PMVDITRDPR WGRVSEGFGE DTYLTSEIAR VMVKGFQGDD LTGRHSLMTS VKHFALYGAA EGGRDYNTVD MSPQRMFQDY MPPYKAAIDA GSYGVMASLN SINGVPATAN RWLLKDVLRD QWHFKGITIS DHGAIKELIK HGVAADPSDA ARIAVHAGIG MSMSDEYFER YLPDLVKRGV VNIKDIEDAC RQVLNMKYDM GLFQDPYRHL GPVGSDPLDT NAESRLHRAE ARDVARRSLV LLKNRLNILP LAKSGTIAVV GPLADSKRDI IGSWSAAGRP AQAVTVYEGI RKAVGYNARV YYAKGSNVTN HPGLIKFLNE YDESVVVDPR SPQAMIDEAV DAAKKSDVVI AVVGESQGMA HEASSRAKIT IPPEQKALIA ALKATGKPLV LVLMNGRPLD LSREDQQANA ILETWFSGTE GGNAIADVLF GDYNPSGKLP MTFPRSVGQI PMYYNQLPTG RPYSAEAPNK YTSHYFDEAN GPLYPFGYGL SYTTFAVSDV ALSSPTMKRN GSVNASVTVT NTGKRAGETV VQLYLHDVVA SVSRPVKELR GFRKVMLQPG ESQQVNFTIT PQALMFYNQQ MQQVVEPGQF DVMIGLDSQR VKHGSFTLQ
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