Gene Dd703_2338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2338 
Symbol 
ID8086725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp2752228 
End bp2753253 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content59% 
IMG OID644836412 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002987944 
Protein GI242239763 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTT TAAGCCCCAT CAATCAGGCT CGCTGGGCGC GTTTTCGCGC CAACCAGCGC 
GGCTACTGGT CGCTCTGGAT TTTTCTGGCG GTCTTCATCA CCACCTTGTT TTCCGAGTTT
ATCGCGAACG ACAAGCCGCT GTTGGTACGC TATGACCAGC AGTTCTACGT CCCGGTATTG
ATGAATTACA GCGAAACCAC CTTTGGCGGC GAGCTCTCTA CGCCGGCGGA CTACCGCGAT
CCGTATCTGG CCTCCCGCAT TGAACAACAC GGTTGGGCGC TATGGCCGCT GGTGCGCTAC
CACTACCGCA CCATTAACTA CGCCGCCGAC CTGACCTTCC CTTCGCCGCC GTCGCGCCAA
AATCTGCTGG GTACCGATAG CCAGGGGCGC GACGTACTGG CGCAGGTGTT GTACGGATTT
CGAATTTCCA TGTTGTTCGG TCTGGCCCTG ACCTTGGCGT CCAGCCTGTT CGGCATCGTG
GCCGGCGCGA CGCAAGGCTA TTATGGCGGC CGTCTGGATC TGTGGGGCCA ACGTTTCATC
GAAGTCTGGT CCGGCATGCC GACGCTGTTT CTGATTATCC TGCTCTCCAG CGTGATCCAG
CCCAATTTCT GGTGGTTGCT GGGGATCACG GTATTGTTCG GTTGGATGCA ACTGGTCAGC
GTCGTGCGCG CCGAATTTTT ACGCACCCGC AATTTCGACT ATATCCGGGC GGCGCAGGCG
ATGGGCGTCA GCGACCGGGC CATCATGTTC CGCTGCATGC TGCCCAATGC GATGGTGGCG
ACGCTCACCT ATCTGCCGTT TATCCTCTGC GCCTCCATCA CTACCCTGAC TTCGCTTGAT
TTTCTGGGGT TCGGCTTACC GCTGGGATCC GCGTCGTTGG GCGGCCTGCT GCTGGAAGGG
AAAAACAACC TACAGGCGCC CTGGCTGGGC ATTACGGTCT TTCTGGTGCT GGCGATCGTG
CTGTCCCTGC TCATTTTCAT CGGCGAAGCG GTACGCGACG CCTTCGACCC AGGCAAGGTG
CATTAA
 
Protein sequence
MSRLSPINQA RWARFRANQR GYWSLWIFLA VFITTLFSEF IANDKPLLVR YDQQFYVPVL 
MNYSETTFGG ELSTPADYRD PYLASRIEQH GWALWPLVRY HYRTINYAAD LTFPSPPSRQ
NLLGTDSQGR DVLAQVLYGF RISMLFGLAL TLASSLFGIV AGATQGYYGG RLDLWGQRFI
EVWSGMPTLF LIILLSSVIQ PNFWWLLGIT VLFGWMQLVS VVRAEFLRTR NFDYIRAAQA
MGVSDRAIMF RCMLPNAMVA TLTYLPFILC ASITTLTSLD FLGFGLPLGS ASLGGLLLEG
KNNLQAPWLG ITVFLVLAIV LSLLIFIGEA VRDAFDPGKV H