| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2262 |
|---|
| Symbol | |
|---|
| ID | 8086649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2664317 |
|---|
| End bp | 2665276 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644836337 |
|---|
| Product | thioredoxin reductase |
|---|
| Protein accession | YP_002987869 |
|---|
| Protein GI | 242239688 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0017275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG CCAAACATCG TAAATTATTG ATTCTGGGTT CAGGCCCGGC CGGTTACACC
GCCGCGGTCT ATGCTGCACG GGCCAATTTA CAACCGCTGC TGATCACCGG CATGGAAAAA
GGCGGCCAGT TAACCACCAC GACCGAAGTC GAAAACTGGC CCGGCGATCC GAACGATCTG
ACCGGCCCGC TGCTGATGGA ACGCATGCAT GACCATGCCG TCAAGTTCAA TACCGAAATC
GTTTTCGACC ACATCAACCG CGTCGATCTG CAACAACGCC CATTCCGCCT GTTCGGCGAC
AGCGATGAAT ACACCTGCGA CGCGCTAATC ATCGCAACCG GCGCTTCCGC ACGTTATTTA
GGGCTTCCCT CTGAAGACGC CTTTAAAGGC AAGGGCGTTT CCGCCTGCGC CACCTGCGAC
GGTTTCTTCT ATCGCCAACA GAAAGTCGCC GTCGTCGGCG GCGGCAATAC CGCCGTGGAA
GAAGCGTTGT ACCTGTCCAA CATCGCCGCC GAAGTGCACC TGATTCATCG CCGCGACAGC
TTCCGCGCTG AAAAAATTCT GATCGACCGC CTGATGGCGA AAGTCGACAG CGGCAACATC
GTACTGCACA CCTATCGCAC GCTGGATGAA GTGATCGGCG ACGACATGGG CGTTACCGGC
GTGCGCCTGC GCAATACGCA GAGCGACGCC ACCGAACAGT TGGATATCGC CGGTGTCTTC
ATCGCTATTG GCCACAGCCC GAATACCGCG ATCTTCAACG GCCAGTTGGC GCTGGAAAAC
GGCTACATCA AGGTGCAATC TGGCACCAAC GGCAACGCTA CCCAGACCAG CATTCCTGGC
GTTTTCGCCG CCGGCGACGT CATGGATCAC AACTATCGCC AGGCGATTAC ATCTGCCGGC
ACCGGTTGTA TGGCCGCGTT GGATGCTGAA CGCTATCTGG ACAGCCTGAA CGACAAATAA
|
|---|
| Protein sequence | MSTAKHRKLL ILGSGPAGYT AAVYAARANL QPLLITGMEK GGQLTTTTEV ENWPGDPNDL
TGPLLMERMH DHAVKFNTEI VFDHINRVDL QQRPFRLFGD SDEYTCDALI IATGASARYL
GLPSEDAFKG KGVSACATCD GFFYRQQKVA VVGGGNTAVE EALYLSNIAA EVHLIHRRDS
FRAEKILIDR LMAKVDSGNI VLHTYRTLDE VIGDDMGVTG VRLRNTQSDA TEQLDIAGVF
IAIGHSPNTA IFNGQLALEN GYIKVQSGTN GNATQTSIPG VFAAGDVMDH NYRQAITSAG
TGCMAALDAE RYLDSLNDK
|
|---|
| |