| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2247 |
|---|
| Symbol | |
|---|
| ID | 8086634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2644311 |
|---|
| End bp | 2645501 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644836324 |
|---|
| Product | putative MFS family transporter protein |
|---|
| Protein accession | YP_002987856 |
|---|
| Protein GI | 242239675 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCG CAGTCGCTAC TCTTCTGTTT GGTTTTTCCT CCATGTCCAC CTATACACGC
CCCGTCTTAC TGCTGCTTAG CGGTCTGTTG CTGCTGACGA TCTGCTTAGC GGTTCTGAAT
ACTCTGGTGC CTTTGTGGCT GAATGAACGG CAGTGGCCGG TATGGCAGGT CGGGCTGGTC
GGAACCGGCT ATTTTACCGG TAATCTGGTC GGTACGCTGC TTGCCGGCAG GTTGATTCAT
CGCTGGGGGT TTAATCGCAG TTATTATCTG GCTGCTGCGA TCTTCGCGTT GGCGACCGGC
ATGTTGGGCG TGTCGTCGGG GATGTGGAGC TGGCTGGTAT GGCGGTTTGT GGCCGGCGTC
GCCTGTGCGC TGATCTGGGT GGTGGTGGAG AGCGCGCTGC TGTGCAGCGG GCATGCCGTT
AAACGGGGCC AACTGCTGGC GGCGTATATG ATGTCTTATT ATTTCGGCAG CGTGCTGGGT
CAATTGCTGC TGGGAATGAT GCCGAGCGCA CAAGGTAGCA TTCTGCCCTG GCTGGTCATG
CTGGTGTTGG CGGCGATGTT CCCGTTGTTG TTCGCCCGCA TTCCGCCGCC GCAGCCGGTG
ACGCACCAGG CCGGCGTATG GCGCATGTTG TGTTATCGCC GCGCCCGACT GGGCATTGAC
GGTTGTGTCA TTTCCGGCGT GATCCTCGGG TCGTTATATG GATTGATGCC GCTCTACCTG
GCGCATCAGG GGATGAGTGA CGCCCAGGTC GGATACTGGA TGGCGTTGCT GATTAGCGCC
GGTATCGCCG GGCAGTGGCC GGTAGGGCGC TTGGCGGATC GCTTTGGCCG GTTGATGGTG
CTGCGGGGGC TGGTTCTCGC CGTGGTAGTG GGCGCGCTGG CGGTGCTGGG GATGGGCAGT
GCGGGTATGG CTTTCGCTTT GTGCCTGCTG GGGGCGGCGG GTTTTACGCT CTACCCTGTC
GCGATGTCCT GGGCCTGTGA GCGCGTTGCG CCGGATGAGC TGGTGGCGAT GAATCAGGCC
TTGTTGCTCA GCTATACCCT CGGCAGTCTG TGCGGGCCGT CGCTGGCGGC GCTATTGATG
CAGGCGTATT CCGATGCACA GTTGTTCGTG CTGATCGCCG TGGTGGCGCT GGGATACCTG
ATTCTGTTGC TGAAAACAAC CGACCATCAT CCGCGCCCGC TACCGGTATA G
|
|---|
| Protein sequence | MMRAVATLLF GFSSMSTYTR PVLLLLSGLL LLTICLAVLN TLVPLWLNER QWPVWQVGLV
GTGYFTGNLV GTLLAGRLIH RWGFNRSYYL AAAIFALATG MLGVSSGMWS WLVWRFVAGV
ACALIWVVVE SALLCSGHAV KRGQLLAAYM MSYYFGSVLG QLLLGMMPSA QGSILPWLVM
LVLAAMFPLL FARIPPPQPV THQAGVWRML CYRRARLGID GCVISGVILG SLYGLMPLYL
AHQGMSDAQV GYWMALLISA GIAGQWPVGR LADRFGRLMV LRGLVLAVVV GALAVLGMGS
AGMAFALCLL GAAGFTLYPV AMSWACERVA PDELVAMNQA LLLSYTLGSL CGPSLAALLM
QAYSDAQLFV LIAVVALGYL ILLLKTTDHH PRPLPV
|
|---|
| |