Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_2174 |
Symbol | |
ID | 8086560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2561909 |
End bp | 2563135 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644836250 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_002987783 |
Protein GI | 242239602 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.120475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTCAT TCGTTGCGCG GCAGCCTATA TTTGACAGGC ACCTGAATAC GGTAGCCTAT GAAATTTTTT TTAGAAATGG CTTGACCAAC GCCTTTCCCA ATGTGTCCTC CGAGTATGCG ACGGCCCAGA TCATTTCGGA TCAGTTCCTG TGTGCGGCGC CGTCCCACCT GGTTGGGCAT TATTCCGCAT TCGTTAATTT TCCCTATCAA TTGATTGTTA ACGGCGTCGC GCATGCGTTG CCGCGTAGCA AAGTGGTGAT TGAAGTATTA GAGCAGGCGA CACCTGATGA CGACTTATTG AAGGCGGTGC GAAAACTACA TGATGATGGG TTTCGCATCG CACTGGATGA CTTTTCTTTA GACAGTGCCT GGGATCGGTT CATCCCCTAC ATTCACATCA TCAAATTTGA TGTGCAGAAT ACTGAGTTTA GTGATATCGA CCGCTATCTC AGTAAACAGG GTAAAAAAAT GAACCATGTG ACGCTGTTGG CTGAAAAAAT AGAGTCGCAT GTCGATTTTG AACGATATAA AAAATATGGC TTTGATCTTT TTCAAGGCTA TTTTTTTAGC AAGCCGGAAG TGATCAAAAA TCGCAGGTTA TCACAGAATG AGATCGCCAC GTTCCAATTG GTAAAAGCGG TAAGCGACGA AGAGATTGAT TTTAAAAAAG TGGAGATGTT GATTAAGGGT GATGTCTCTC TTTCCTATAA AGTCATGCGC TACGCAAAAA ATATTTTATA CCGGACGGTC GGCGCCAGTA ATTTTAAATG CCTGTCGTTG AAAGATATCG CCATGTACCT CGGTAAGAAT GAACTGCGCC GTTTTGTGGC GATTGCCTGT TTATCCGCTG CGGGTGATAT CGAGGTGGAG GAACTCTATC AAGTGAGTTT GACCCGCGGG CGGTTCTGCG AACTGGCGGC GGAAAAAATG GGCTGTCAAT CGTCAATGCC GGATGCGTTT TTATGCGGGT TGTTCTCACT GCTGGACGTG ATCCTCGATC TCCCGCTGAA AGATATTTTT AGGCATATCA CCCTGTCTGA AGCGGTAGCC AGGGCCTTGC TCCAGCATGA AGGTAAACTT TATGCGCTAT TACGGCTGTC GCAACTGTAT GAGCAAGGCT TATGGGAAGG CGTTGGCGAG ATGGCGAAAT CGATGCAACT GTCGGAGCGC AGTGTCATTA CGGCAATGGA CAGCGCCACC CGGTGGGCGG ATGAATTCAG TATTTAG
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Protein sequence | MYSFVARQPI FDRHLNTVAY EIFFRNGLTN AFPNVSSEYA TAQIISDQFL CAAPSHLVGH YSAFVNFPYQ LIVNGVAHAL PRSKVVIEVL EQATPDDDLL KAVRKLHDDG FRIALDDFSL DSAWDRFIPY IHIIKFDVQN TEFSDIDRYL SKQGKKMNHV TLLAEKIESH VDFERYKKYG FDLFQGYFFS KPEVIKNRRL SQNEIATFQL VKAVSDEEID FKKVEMLIKG DVSLSYKVMR YAKNILYRTV GASNFKCLSL KDIAMYLGKN ELRRFVAIAC LSAAGDIEVE ELYQVSLTRG RFCELAAEKM GCQSSMPDAF LCGLFSLLDV ILDLPLKDIF RHITLSEAVA RALLQHEGKL YALLRLSQLY EQGLWEGVGE MAKSMQLSER SVITAMDSAT RWADEFSI
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