| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2150 |
|---|
| Symbol | |
|---|
| ID | 8086536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2537892 |
|---|
| End bp | 2538350 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644836226 |
|---|
| Product | ribose-5-phosphate isomerase B |
|---|
| Protein accession | YP_002987759 |
|---|
| Protein GI | 242239578 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
|---|
| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAA TCGCCATTGG TGCGGATGAC GCTGCGTATG AATTACGCAG TACCATTACG
AATTATCTCG ATTCGCTCAA TATTCCCTGG GTGGATTTCA GCAGCGATAA AAATGCGGAT
AACCGTTATT ACCCGGATGT GGCGCACGCC GTCGCCATGT CGATTAAAGC CGGTCAGCAG
GATCGCGGCA TTTTAATCTG CGGCACCGGC ATTGGGATGA GCATTGTGGC GAACAAAGTG
CCGGGCATTC GTGCCGCGCA GTGCCACGAT ACGTTCTCGG CGGAGCGGGC GCGGAAAAGC
AACAACGCGC AGATCGTCAC GTTGGGCGCC CGGGTGATCG GCGCTGAACT GGGCAAGCAG
ATTATTCGCG CCTGGCTGAA TGCCGAGTAT GAAGGCGGCG GCTCGGCGGC GAAGGTGGAA
CGTATCGATT ACTATCAAAA TCAACATATT GCCGAATAG
|
|---|
| Protein sequence | MKPIAIGADD AAYELRSTIT NYLDSLNIPW VDFSSDKNAD NRYYPDVAHA VAMSIKAGQQ
DRGILICGTG IGMSIVANKV PGIRAAQCHD TFSAERARKS NNAQIVTLGA RVIGAELGKQ
IIRAWLNAEY EGGGSAAKVE RIDYYQNQHI AE
|
|---|
| |