| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_2032 |
|---|
| Symbol | |
|---|
| ID | 8090629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2411257 |
|---|
| End bp | 2412018 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644836111 |
|---|
| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
|---|
| Protein accession | YP_002987644 |
|---|
| Protein GI | 242239463 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAG ATTCATTCAA TTTACAGGGC AAAATTGCTC TGATCACAGG TTGCGATACC
GGTCTGGGTC AAGGTATGGC GATCGGGCTA GCCGAAGCAG GCTGTGACAT TGTGGGTGTC
AATATCGTCG AGCCGAAAGA CACGATTGAA AAAGTCACCG CTCTGGGCCG TCGTTTTCTC
AGCCTGACGG CTGACATGAG CGATGTCTCC GGCCATGCCG CTCTGGTGGA AAAAGCTGTC
GCCGAATTCG GCAAAGTGGA TATCCTGGTG AACAACGCAG GTATTATTCG CCGCGAAGAT
GCTATCGAAT TCAGTGAAAA GAACTGGGAC GATGTGATGA ACCTTAACAT CAAGAGCGTC
TTCTTCATGT CTCAGACCGT TGCGCGCCAG TTCATCAAGC AAGGCACCGG CGGCAAAATC
ATCAATATCG CGTCCATGCT GTCCTTCCAG GGTGGTATCC GTGTTCCTTC CTATACCGCA
TCCAAGAGCG CGGTTATGGG GATTACCCGC TTGATGGCTA ACGAATGGGC GAAACACAAC
ATCAACGTCA ATGCCATCGC GCCAGGCTAT ATGGCCACCA ACAACACCCA GCAGCTGCGC
GCGGATCAGG ATCGCAGTAA AGAAATTCTG GATCGCATCC CGGCCGGTCG TTGGGGTTTG
CCGCAAGACC TTAAAGGCCC TGCAGTATTC CTGGCATCAA GCGCCTCTGA TTATATCAAC
GGCTATACCG TTGCCGTAGA CGGTGGCTGG CTGGCTCGCT AA
|
|---|
| Protein sequence | MILDSFNLQG KIALITGCDT GLGQGMAIGL AEAGCDIVGV NIVEPKDTIE KVTALGRRFL
SLTADMSDVS GHAALVEKAV AEFGKVDILV NNAGIIRRED AIEFSEKNWD DVMNLNIKSV
FFMSQTVARQ FIKQGTGGKI INIASMLSFQ GGIRVPSYTA SKSAVMGITR LMANEWAKHN
INVNAIAPGY MATNNTQQLR ADQDRSKEIL DRIPAGRWGL PQDLKGPAVF LASSASDYIN
GYTVAVDGGW LAR
|
|---|
| |