Gene Dd703_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_2021 
Symbol 
ID8090618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand+ 
Start bp2401363 
End bp2402304 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content55% 
IMG OID644836100 
ProductPTS system, mannose/fructose/sorbose family, IIB subunit 
Protein accessionYP_002987633 
Protein GI242239452 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID[TIGR00824] PTS system, mannose/fructose/sorbose family, IIA component
[TIGR00854] PTS system, mannose/fructose/sorbose family, IIB component 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.511847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTATGCA CTCACGGCTC CACAGCCGGG CCGCTGTTAA AAACAGCGGA AATGATTCTC 
GGAGAACAAC AGAATGTTGG CTGGATTGAT TTTGTTCCCG GGGAAAATGT CGAGATTTTG 
ATGGAGAAAT ATCAGGCAAA GCTCGCGGAA CTGGATACAT CAGAAGGGGT TCTTTTTCTG 
GTGGATACCT GGGGCGGCAG CCCATTCAAC GCGGCCAGTC GCCTGGTGAA CAACAAACAA 
AGGTATGAAG TGGTCGCCGG CGTCAACATT CCTATGCTGG CCGAGACCTT TATGGCCCGG 
GATGACGATC CCGCGTTTGA AGAGTTGGTC AGCATCGCGG TAGAAGCCGG AAGAGCCGGT 
GTAAAAGCGC TGAAAGCCGT CGAGCCGGAA ATTACGCCGG TTCGTAAACA GCCTGCGGCG 
CCCAAAGCCG CTCCTCCGGG GCCGGGTGGG CATATGAAAA TTGGACTGGC TCGCATCGAC 
GACCGTCTGA TCCATGGGCA AGTCGCCACC CGCTGGACCA AAGAAACCAA CGTTAGCCGG 
ATTATCGTCG TCAGCGACGA AGTCGCGGCG GATACCGTGC GCAAAACTCT GCTCACCCAG 
GTGGCGCCGC CCGGCGTTAC CGCCCATGTG GTGGATGTCG CCAAGGCCGT GCGCGTTTAC 
AACAATCCCA AATATGCCGC TGACCGCGTC ATGCTGTTAT TCACTAACCC AACCGATGTG 
GTACGGCTGG TAGAGGATGG CGTCAAGATT ACATCGGTCA ATATCGGCGG TATGGCTTAC 
CGGCAGGGGA AAACCCAGGT CAACAACGCT GTATCCATCG ATGAACAAGA CATCGTCGCC 
TTTAACAAAC TCCACGACCG TGGGATCGAA CTGGAAGTTC GCAAGGTTTC CACCGATACC 
CGGCTCAATA TGATGGATTT GATCAACAAG GCCGCGCGTT AG
 
Protein sequence
MLCTHGSTAG PLLKTAEMIL GEQQNVGWID FVPGENVEIL MEKYQAKLAE LDTSEGVLFL 
VDTWGGSPFN AASRLVNNKQ RYEVVAGVNI PMLAETFMAR DDDPAFEELV SIAVEAGRAG 
VKALKAVEPE ITPVRKQPAA PKAAPPGPGG HMKIGLARID DRLIHGQVAT RWTKETNVSR 
IIVVSDEVAA DTVRKTLLTQ VAPPGVTAHV VDVAKAVRVY NNPKYAADRV MLLFTNPTDV 
VRLVEDGVKI TSVNIGGMAY RQGKTQVNNA VSIDEQDIVA FNKLHDRGIE LEVRKVSTDT 
RLNMMDLINK AAR