Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1939 |
Symbol | |
ID | 8090535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | - |
Start bp | 2307251 |
End bp | 2307883 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644836017 |
Product | outer membrane protein W |
Protein accession | YP_002987551 |
Protein GI | 242239370 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.940404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA CCTCTTTGGT ACTGATGGCG GCAGCTTTAC TGCCAACTCT GGCGCAGGCT CATCAGGCTG GGGATGTAAT TGTTCGTGCG GGGACGGCAA CGGTACATCC GATGGAAAGC TCAGATAATG TGTTAGGGCT GGGATCCTTC AATGTTAACG ACAATACCCA ATTAGGGCTG ACGCTCGGTT ATATGGCTAC CGATAATATC GGGGTTGAAT TACTGGCGGC GACACCTTTC AAACACAAGG TCGGTGTGGG AAGTGTTGGC ACTATCGCCG AAGTCAAACA TCTGCCGCCG ACGCTGATGG CTCAGTATTA TTTCGGACAG AGCGCGGATA AGCTGCGTCC TTATTTGGGG CTTGGCGTTA ACTACACCAC ATTCTTTGGT GAGAAATTTA ATCAGACCGG GGAGAATGCC GGGTTGAGCG ACCTGAGTCT GAAAAGCTCG TGGGGGGTAG CAGCCCAGGC TGGGTTGGAT TACAACCTGA ATAAAAACTG GTTGTTGAAT ATGTCAGTAT GGTGGATGGA TATCGACACC ACCGTTAAAT TCAAAGCGGG TGATTCGGAG CAGAGTATTA AAACACGTCT GGATCCCTGG GTATTTATGT TTGGATTCGG TTATAAATTC TGA
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Protein sequence | MKKTSLVLMA AALLPTLAQA HQAGDVIVRA GTATVHPMES SDNVLGLGSF NVNDNTQLGL TLGYMATDNI GVELLAATPF KHKVGVGSVG TIAEVKHLPP TLMAQYYFGQ SADKLRPYLG LGVNYTTFFG EKFNQTGENA GLSDLSLKSS WGVAAQAGLD YNLNKNWLLN MSVWWMDIDT TVKFKAGDSE QSIKTRLDPW VFMFGFGYKF
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