| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1929 |
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| Symbol | |
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| ID | 8090525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 2296032 |
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| End bp | 2296901 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644836007 |
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| Product | 23S rRNA pseudouridylate synthase B |
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| Protein accession | YP_002987541 |
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| Protein GI | 242239360 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAA AACTACAGAA GGTGCTGGCG CGTTCCGGTC ATGGTTCGCG CCGCGAAATT
GAATCTATTA TCCAGCAGGG CCGCGTCAGT GTGGATGGCA AAATCGCCAC GCTGGGCGAC
CGTGTGGACG TCACCCGTGC AACGAAAATT CGTATTGACG GTCATGTCGT TACGGTACGC
GAGACGGAAG AAACCGTATG CCGGGTGTTG ATGTATTACA AACCGGAAGG TGAACTTTGT
ACCCGCAGCG ATCCGGAGGG GCGTCCGACG GTGTTCGACC GTTTACCGCG CATTCAGGGG
GCTCGCTGGA TCGCTGTTGG TCGTCTGGAT GTTAATACGT CTGGATTGTT GTTGTTCACC
ACCGATGGCG AACTGGCGAA CCGACTGATG CACCCCAGCC GTGAAGTGGA GCGCGAATAT
GCCGTGCGTG TCTTTGGCGA GGTGGGGGAT GACAAAATCC GTCAGTTGAG CAAAGGCGTT
CAACTGGATG ATGGGCCAGC GGCATTTCGC TCCATTCGCC ATCAGGGCGG CGAGGGGCTG
AATCAGTGGT ATAACGTCAC GCTGACTGAA GGCCGCAATC GCGAAGTTCG CCGCTTGTGG
GAAGCTGTCG GGGTGCAGGT CAGCCGCCTG ATTCGAGTCC GCTATGGCGA TATCCAACTG
CCGAAGGGGT TGCCTCGCGG CGGCTGGTCG GAAATGAGTC TGGAGGATGT CAACTACCTG
CGCGAGTTGG TGCAGCTGTC GCCGGAAACC GTCAGTAAAC TGCCGGTGGA GCGTGAGCGC
CGTCGTCTTA AAGCCAACCA GATTCGTCGT GCGGTTAAAC GTCACAGCTT GGTTGGAGCC
CGCCGTAACG CACCGAAACG TAACGGGTAA
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| Protein sequence | MSEKLQKVLA RSGHGSRREI ESIIQQGRVS VDGKIATLGD RVDVTRATKI RIDGHVVTVR
ETEETVCRVL MYYKPEGELC TRSDPEGRPT VFDRLPRIQG ARWIAVGRLD VNTSGLLLFT
TDGELANRLM HPSREVEREY AVRVFGEVGD DKIRQLSKGV QLDDGPAAFR SIRHQGGEGL
NQWYNVTLTE GRNREVRRLW EAVGVQVSRL IRVRYGDIQL PKGLPRGGWS EMSLEDVNYL
RELVQLSPET VSKLPVERER RRLKANQIRR AVKRHSLVGA RRNAPKRNG
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