Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1898 |
Symbol | |
ID | 8090494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 2260542 |
End bp | 2261816 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644835977 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002987511 |
Protein GI | 242239330 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.164459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTACCC CGCTGTCTTC GCATGGAATG TCCGCTTCTG TCATTGATGA CATTCAATAT CCACGTAAAA CCTCTATTTC GACCTATAAA ATTCCGTTCA TCAGCCGCGG TACGCCCCAG TTCATTCGGG TGACGCTGGC GCTGTTTTCC GCCGGCCTGG CTACCTTTGC CCTTCTATAC TGCGTTCAGC CGATTCTGCC GGTGTTGTCG CTGGCGTTTG ATGTTTCTCC GGCGACCGGC AGCCTGTCCT TGTCGGTATC CACCATCACG ATGGCGATCG GGCTGCTGTT TACCGGCCCC TTGTCCGATA CCATCGGACG TAAAAACGTC ATGGTGGTTT CGTTGCTGTT GGCGGCAATC TGTACGCTGA TATGCAGCTT TATGACCAGC TGGCACGCCA TCCTGGTGAT GCGCGCCTTA ACCGGCTTAG CGTTAAGCGG CGTTGCCGCG GTCGCGATGA CGTATTTGAG CGAAGAAATT CACCCGAGCG TAGTGGCCTT TTCCATGGGG TTGTATATCA GCGGCAACTC GATTGGCGGT ATGAGCGGTC GGTTGCTGAC CGGGGTCATG ACCGATTTTT TTGGCTGGCG TATAGCCATG GCGGCGATCG GTTTTATCGC CCTGGCCGCA TCCATCACTT TTTGGCGAGC GTTGCCGGCG TCCCGCCATT TTCGCGCCGG CTCCCTGCGG CCGCGAACCT TGCTGATCAA TGCCCGTTTG CACTGGCGGG ATGCCGGTCT GCCCCTGCTG TTTGTGGAAG GTTTCCTGCT GATGGGGTCT TTTGTGACGC TGTTCAACTA TATTAGCTAC CGCCTGCTGG CTGAACCTTA CCATCTGAGC CAAACCGTGG TCGGTATGCT GTCCGTGGTT TTTCTGACCG GTAGTTACGC CTCTCCTCGC GCGGGCGCGA TGACTGTCCG TTTTGGTCGC GGGCCGGTAC TCGTCGGTTT TACTGCGCTT ATGTTGTTGG GATTGCTTGT GACGATGTGC GACTCGTTGA TTGCGGTCTT CTTCGGCATG ATGTTGTTCA CGGCTGGCTT CTTTGCCTCC CATTCGGTGG CGAGCAGCTG GATTGGGCTG CGTGCGCAAC GCGCCAAAGG TCAGGCCGCC TCCATGTACC TGTTTTTCTA CTATCTGGGT TCCAGCCTGG CGGGAACAAC CGGCGGATTC TTTTGGTATC ACTACGGCTG GAATGGTGTC GTCGTGTTCT TATCCCTGCT GCTGTTCATG GCCGTACTCA TCGGTTTCAA ACTTAATGCG TTGACTCACA AATAA
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Protein sequence | MSTPLSSHGM SASVIDDIQY PRKTSISTYK IPFISRGTPQ FIRVTLALFS AGLATFALLY CVQPILPVLS LAFDVSPATG SLSLSVSTIT MAIGLLFTGP LSDTIGRKNV MVVSLLLAAI CTLICSFMTS WHAILVMRAL TGLALSGVAA VAMTYLSEEI HPSVVAFSMG LYISGNSIGG MSGRLLTGVM TDFFGWRIAM AAIGFIALAA SITFWRALPA SRHFRAGSLR PRTLLINARL HWRDAGLPLL FVEGFLLMGS FVTLFNYISY RLLAEPYHLS QTVVGMLSVV FLTGSYASPR AGAMTVRFGR GPVLVGFTAL MLLGLLVTMC DSLIAVFFGM MLFTAGFFAS HSVASSWIGL RAQRAKGQAA SMYLFFYYLG SSLAGTTGGF FWYHYGWNGV VVFLSLLLFM AVLIGFKLNA LTHK
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