| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1847 |
|---|
| Symbol | |
|---|
| ID | 8090443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 2198720 |
|---|
| End bp | 2200093 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644835929 |
|---|
| Product | ATP-dependent RNA helicase DbpA |
|---|
| Protein accession | YP_002987463 |
|---|
| Protein GI | 242239282 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTCAT TTGCTGAACT GAACGCGCTT CCTGCGGAAC AACTTACCAC CCTTAATGCG
CTGGGCTACC TGACCATGAC CCCGATTCAG GCGGCGGCGT TACCGGCGAT CCTGGCAGGA
AAAGATGTCC GCGCGCAGGC GAAAACCGGC AGCGGCAAAA CCGCTGCTTT CGGCCTGGGC
CTGTTACAGC ATCTTGATGC CGGGCGGTTC AATACCCAGT CGCTGGTGCT GTGCCCGACC
CGTGAACTTG CCGATCAGGT TGCCAACGAA CTGCGCCGCC TGGCGCGCTA CATGCCGAAT
ATCAAGGTGC TGACGCTGTG CGGCGGCGTA CCGTTCAGCA TCCAGCGCGA TTCGCTGACC
CATGCTCCCC ACATCATTGT CGCTACGCCG GGCCGACTGC TGGATCACCT GGAAAAGGAG
ACCGTCAACC TTGATGCCCT GCAGACGCTG GTGCTGGATG AAGCGGATCG CATGCTTGAT
ATGGGGTTCG CCGACGCCAT CGATGCGGTT ATCGCCCATG TGCCCGATCA GCGTCAGACG
CTGTTGTTTT CCGCTACCTG GCCGGACGCC ATTGCCGCCA TCAGTCATCG TATCCAGCAC
GATCCGCTGG TTATTGAAAT CGACACGGTG GATGAACTGC CGGCGGTTGA ACAGCAATTC
TATGAGGTTT CCCGCAGCGG CAAACTCGAT CTGCTGCAGA AACTGCTGAG CCGCGAACAG
CCTGCGTCCT GCGTGGTGTT CTGCAATACC AAAAAAGACT GTCAGGCGGT ATACGACGCG
CTGACCGCCA GTCACCAGAG CGTGCTGGCA CTGCATGGCG ACATGGAACA GCGTGACCGC
GATCAGACAC TGGTGCGGTT TGCTAACGGC AGCAGCCGTG TGCTGGTGGC CACCGACGTT
GCCGCGCGCG GGCTGGATAT CAAAGCGCTG GAGATGGTGG TTAACTTCGA GCTGTCGTGG
GATCCCGAAG TGCATATCCA CCGTATCGGG CGTACCGCCC GCGCCGGTGA AAGTGGGCTG
GCCATCAGCC TTTGCGCACC GGAAGAGGCC CAACGCGCCA ATGCGCTCGA AGAAATGCTC
AATCTGAAAC TCAGCTGGCA CCCGCTGCCG ACCGGGCTGC GCATCATCCC GCTGGAAGCG
ACGATGGCGA CGCTGTGCAT CGACGGCGGC AAGAAAGCCA AAATGCGTCC CGGCGATATT
TTGGGGGCAT TAACCGGCGA CATGGGGCTG GATGGCGCCG ATATCGGAAA AATTGCCATT
CACCCGACCC ATGCCTACGT GGCCGTGAGG CAGTCGGTGG CGCGCCATGC GTGGAAGCAG
TTGCAGCAGG GGAAAATTAA AGGCAAAGCG GTGAAGGTTC GGTTGCTGAA GTAA
|
|---|
| Protein sequence | MTSFAELNAL PAEQLTTLNA LGYLTMTPIQ AAALPAILAG KDVRAQAKTG SGKTAAFGLG
LLQHLDAGRF NTQSLVLCPT RELADQVANE LRRLARYMPN IKVLTLCGGV PFSIQRDSLT
HAPHIIVATP GRLLDHLEKE TVNLDALQTL VLDEADRMLD MGFADAIDAV IAHVPDQRQT
LLFSATWPDA IAAISHRIQH DPLVIEIDTV DELPAVEQQF YEVSRSGKLD LLQKLLSREQ
PASCVVFCNT KKDCQAVYDA LTASHQSVLA LHGDMEQRDR DQTLVRFANG SSRVLVATDV
AARGLDIKAL EMVVNFELSW DPEVHIHRIG RTARAGESGL AISLCAPEEA QRANALEEML
NLKLSWHPLP TGLRIIPLEA TMATLCIDGG KKAKMRPGDI LGALTGDMGL DGADIGKIAI
HPTHAYVAVR QSVARHAWKQ LQQGKIKGKA VKVRLLK
|
|---|
| |