Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1788 |
Symbol | |
ID | 8090384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 2130703 |
End bp | 2131530 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644835872 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002987406 |
Protein GI | 242239225 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0709875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGAAA TGAGACAACA GGGTTCGCAG CTTCTCCGGT TGTGGAATGC GTTTTTTAAC TTTTACGGCG CGGCGATGCT GCTGTTTCTG GTGGTGCCGG TGTTGGTGAT CGTGCCGTTG TCTTTCAATG CCGGCTCGTT CCTCAGCTAC CCGCTGGCGG GGTTTTCCCT GCGCTGGTAT CGCGAGTTTT TCCACTCCAG CGAATGGTTG AGCGCGCTGG GCAATAGCCT GCTGATCGCG CCGTTGGCGA CGTTGCTGGC GACGGGGTTG GGCGTGCTGG CCTCGGTGGG GCTGGTGCGC GGCGAATTTC GCGGTAAATC GCTGGTGATG GCGGTGCTGA TCTCGCCGAT GATTGCGCCG GTGGTGATCG TCGCGGTGGG GATGTTCTTT TTCTTTGCCA AACTGTCGCT GCTGAACAGC TATTTCGGTT TGGTGCTGGC GCATGCGGTG CTCGGGGTGC CGTTCGTGGT GATCACCGTG ACCGCCGTCT TGAAGAATTA CGATCAGAAC TTGAACCGGG CCGCCGCCAG CCTTGGCGCG CCGCCGTTGC TGACGTTTCG TAAAGTGACG CTGCCGCTGA TCGCGCCCGG TGTGTTTTCC GGCGCGCTGT TCGCGTTCGC TACGTCGTTT GATGAAGTGA TCGTCACGCT GTTTCTGGCC AGCCCGCGCC AGCGCACGTT GCCGCTGCAA ATGTTCGCCG GGATTCGCGA GAACCTGGAT CCGACCATCG CCGCCGCCGC ATCTATGATG GTGGCCGCCG CGCTGGCACT GTTGATTGTG ATGGAAGTCT TGCGCCGTCG CGCGGAGAAA TTGCGCGGCG GTCATTGA
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Protein sequence | MKEMRQQGSQ LLRLWNAFFN FYGAAMLLFL VVPVLVIVPL SFNAGSFLSY PLAGFSLRWY REFFHSSEWL SALGNSLLIA PLATLLATGL GVLASVGLVR GEFRGKSLVM AVLISPMIAP VVIVAVGMFF FFAKLSLLNS YFGLVLAHAV LGVPFVVITV TAVLKNYDQN LNRAAASLGA PPLLTFRKVT LPLIAPGVFS GALFAFATSF DEVIVTLFLA SPRQRTLPLQ MFAGIRENLD PTIAAAASMM VAAALALLIV MEVLRRRAEK LRGGH
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