| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1744 |
|---|
| Symbol | |
|---|
| ID | 8090340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2071802 |
|---|
| End bp | 2073355 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 644835828 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
|---|
| Protein accession | YP_002987362 |
|---|
| Protein GI | 242239181 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.514978 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCAGA ATTACCCTGT CAGCCAACAT CAATATCCGC TGGATAACAA AATCAAACTG
ATGTCGGTCA CTACGCCCGA CAGCCACATC ACCTATGCCA ATACCGATTT CATCACAGTC
AGCGGCTATC AGCCGGATGA GCTGATGGGG CAGCCGCATA ATCTGATCCG ACATCCCGAT
ATGCCGCCCG TCGCCTTTGC TGATATGTGG AACACCTTGA AAGAAGGCAA AATCTGGACC
GGCATCGTCA AAAACCGCCG CAAAAACGGT GATCATTACT GGGTGAAATC CAGCACGACG
TCATTGAAAA AAGAGGGGCG GCTCATTGGC TATATGTCGG TGCGTACACC CGCATCCGCC
GATGAAATCA GCCATGCCGA AGCACTGTAT GCCCAGGTGA ACGACGGCCA GTTGAAGTAC
CGGGGGTTTC ACAATGGGTT ACTGGTGTAC ACCGGCCCGT TAAAATGGCT CAGCCTGTTC
AAAACGATGC CGCTGCGCTG GCGCATCCGC AGTTACGCCC TATTATTGGG GCTGTTGCCG
TTGGCCATGA CGTTGATATT GTTGCCGAAA ACGTTGACGG TCTGGGGCGC GTTCACCCTG
CTTGCCGCCT GCGCCGGCTT GCTCTGCGAA TTGCTGGTGC AGCATGTGGC TCGCCCGGTA
GAACAGATCC TGGAACAGGC GATGCTATCC GCCACGGGGC AGACGGATAG CCTGCGGCAA
CTCAATCGTG CCGATGAAAT CGGTATGTTG ATGCGAGCCG TTAACCAATC CGGCATGAAT
TTCCGCACTT TCGTCGATGA CGTCAATCTC AATTTGCAGG AGTTGAAAAC CGCCTGCGGC
GAGATCGCGC AGGGCAACCA GATTCTGGCC GACTGCTGTG AAAAAACCGA AGATAGCCTG
CAGCAGACGG CTTCATCGGT CGAGCAACTC ACCTCCACCA TCAAAAGCAA TGCCGACGCA
TCGCTGCGCG CTTCTCAATA CGCGCAAGAC GTCAATCAGG TGGTTAATGC CGGCGAACAG
GCTGTTTCCG AGGTGGCAAG CACCATGGAT ACCATCACCC GCGCCAGCGA GCGAATCACC
GACATCATCA GCGTGCTGGA TAATCTCTCG TTCCAAACCA ACATTCTGGC GGTGAACGCG
GCGGTGGAAG CGGCGCATGC GGGCGAACAA GGGAAAAGCT TCGCCGTGGT TGCCAGCGAA
GTTCGCTCGC TGGCGCAGCG TAGCGCGTCA TCAGCCAAGG ATATCGCCGC GCTTATCGAT
AACACCCTGT CCAGCATCCG GATTGGCGAC CAGCAGGTTT CCCATACCAA TCAGTCGATG
AGCAATATTC TGATCAAGGT GCAAGAGGTG ACTCGACTGA TGAACGAAAT CAGCCAGGCG
ACACGCGAGC AGGCTCAGGG GCTCAACCAG ATCAACGATG CGGTCACTCG TATCGACGAA
CTCACGCACC AGAATACGGC GTTGGCCAGC CAGTCCAATT CTGCAACCAG CCATTTGCAG
CAGCAGATTG CCAGCATGGC GCAGGCAGTG TCCGTCTTTA GTTCGCCGCA CTAA
|
|---|
| Protein sequence | MRQNYPVSQH QYPLDNKIKL MSVTTPDSHI TYANTDFITV SGYQPDELMG QPHNLIRHPD
MPPVAFADMW NTLKEGKIWT GIVKNRRKNG DHYWVKSSTT SLKKEGRLIG YMSVRTPASA
DEISHAEALY AQVNDGQLKY RGFHNGLLVY TGPLKWLSLF KTMPLRWRIR SYALLLGLLP
LAMTLILLPK TLTVWGAFTL LAACAGLLCE LLVQHVARPV EQILEQAMLS ATGQTDSLRQ
LNRADEIGML MRAVNQSGMN FRTFVDDVNL NLQELKTACG EIAQGNQILA DCCEKTEDSL
QQTASSVEQL TSTIKSNADA SLRASQYAQD VNQVVNAGEQ AVSEVASTMD TITRASERIT
DIISVLDNLS FQTNILAVNA AVEAAHAGEQ GKSFAVVASE VRSLAQRSAS SAKDIAALID
NTLSSIRIGD QQVSHTNQSM SNILIKVQEV TRLMNEISQA TREQAQGLNQ INDAVTRIDE
LTHQNTALAS QSNSATSHLQ QQIASMAQAV SVFSSPH
|
|---|
| |