| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1718 |
|---|
| Symbol | |
|---|
| ID | 8090314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 2043379 |
|---|
| End bp | 2045124 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644835803 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_002987337 |
|---|
| Protein GI | 242239156 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.264997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGTACA CTCTGGTTAA TTGCATCTTG TCTGAAAATG CCCGTATGTC CGGAAAACAC
TTTTTCGCAT TGGCGCTCAT GGCGCTGACA TTACCCGCTT TAGCGCAAAC GCCGCAACCC
GGCCCGACGC CGCCGGAAGA TATCCGCCAC AGCGGCTTCG TGTATTGCGT CAACGACGTG
CTGAATACCT TTAACCCGCA AATGGCGCGC AGCGGCCTGA TGGTGGACAC GCTGGCCGCA
CAGATGTATG ACCGTCTGCT GGGCGTCGAT CCCTACACCT ACCGGCTGGT GCCGGAGCTG
GCGCAACGCT GGGAGGTCGC CGACAATGGC TCAACCTACC GTTTCACGCT GCGGCGTGAT
GTCCCTTTCC AGCAGACGCA GTGGTTCACC CCAACCCGGA TGATGAATGC GGACGACGTG
CTGTTCAGCT TTCAGCGCAT GCTGGATAAA AAACACCCGT TCCACGACAT CAACGGCGGC
GAATATCCCT ATTTTGACAG CCTGCAGTTA GCCGACAGCG TGCAAAGCAT CCGTAAACTC
GGGGACTACA GCGTCGAAAT CCGGCTGAAC AGCCCGGACG CTTCGTTTTT ATGGCACCTG
GCCACCCACT ACGCCCCGAT ACTCTCTGCG GAATACGCCC ACCAGCTGAC GCAGATTGAC
CGTCGGGAGC AGATCGATCG TCAACCGGTG GGCACTGGCC CGTATCGCCT TGATGAATAC
CGTTACGGCC AGTATGTCCG GCTTAAGCGC AACGATGATT ATTGGCGCGG CCAACCCCGA
ATGGAGCAGG TGGTCATCGA CCTCGGCTCC GGCGGAACCG GCCGTCTTTC CAAATTATTG
ACCGGCGAAT GCGATGTGCT GGCTTACCCC GCGGCCAGCC AGCTTTCCAT CCTGCGTAAC
GATCCGCGTC TGCGCCTGTC GCTGCGTCCG GGGATGAACG TCGCCTATCT GGCGTTCAAC
GTTCGAAAAC CGCCGCTGGA CGATTCCCGA GTACGCCACG CCATCGCGCT GGCTATCAAT
AACGTTCGCC TGATGCAGTC GATTTACTAC GGTACGGCGG AAACCGCATC GTCGATCCTG
CCGCGCGCGT CGTGGGCGTT CGACAATGAA GCGCGCGTGA CCGAATACAA CCCGGAAAAA
GCGCGCCAGC AGTTGAAAGC GTTGGGTATC CATAACCTGC AGCTGCAACT GTGGGTGCCG
AGCGGTTCAC AATCTTACAA CCCCAGCCCG GTCAAAACCG CCGAACTGAT CCAGGCGGAT
CTGGCGCAGG TGGGCATCAA CGTCACCGTC GTTCCGGTGG AGGGCCGTTT TCAGGAAGCC
CGACTGATGG AGATGAACCA CGACCTGACG CTGGCTGGCT GGGCCACCGA CAGCAACGAC
CCGGACAGCG TGTTCCGGCC GTTGCTTAGC TGTGCGGCCA TCCGTTCGCA AACCAACTAC
GCCCACTGGT GCGATCCCGG TTTCGATCAA GTCTTGCAGG ACGCGCTCTC TTCACAGCAA
CTGTCGCGCC GCATAGAACA CTATAAAAGC GCGAACCATA TCCTGTCTGA ACAACTGCCG
GTACTGCCGC TGGCGTCCTC TTTGCGCATG CAGGCCTACC GTTACGACAT GAGAGGATTG
GTGCTGAGCC CGTTCGGTAA CGCCTCGTTC GCGGGGGTAT ATCGAGATGA TGACCACCAG
GAAAACCCAG GCGCCCGGCA GATGGAACCG TCGGCGGAAA AAACGTCTGC AGGAGAACAA
CCGTGA
|
|---|
| Protein sequence | MLYTLVNCIL SENARMSGKH FFALALMALT LPALAQTPQP GPTPPEDIRH SGFVYCVNDV
LNTFNPQMAR SGLMVDTLAA QMYDRLLGVD PYTYRLVPEL AQRWEVADNG STYRFTLRRD
VPFQQTQWFT PTRMMNADDV LFSFQRMLDK KHPFHDINGG EYPYFDSLQL ADSVQSIRKL
GDYSVEIRLN SPDASFLWHL ATHYAPILSA EYAHQLTQID RREQIDRQPV GTGPYRLDEY
RYGQYVRLKR NDDYWRGQPR MEQVVIDLGS GGTGRLSKLL TGECDVLAYP AASQLSILRN
DPRLRLSLRP GMNVAYLAFN VRKPPLDDSR VRHAIALAIN NVRLMQSIYY GTAETASSIL
PRASWAFDNE ARVTEYNPEK ARQQLKALGI HNLQLQLWVP SGSQSYNPSP VKTAELIQAD
LAQVGINVTV VPVEGRFQEA RLMEMNHDLT LAGWATDSND PDSVFRPLLS CAAIRSQTNY
AHWCDPGFDQ VLQDALSSQQ LSRRIEHYKS ANHILSEQLP VLPLASSLRM QAYRYDMRGL
VLSPFGNASF AGVYRDDDHQ ENPGARQMEP SAEKTSAGEQ P
|
|---|
| |