Gene Dd703_1660 details

Gene Information

• Locus tag: Dd703_1660
• ID: 8090254
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 1961338
• End bp: 1961760
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 644835743
• Product: thioesterase superfamily protein
• Protein accession: YP_002987279
• Protein GI: 242239098
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism
• TIGRFAM ID: [TIGR00369] uncharacterized domain 1

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0414266
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATATGGA AAAGATCGAT CGATCTGGAG CAGCTTAATC AGATGTCCGT CGGGTGCATG 
GTCGGGCATC TGGGGATTCG CATGACGAAT CTGACCGACG ATACCATTGA AGCGGTCATG 
CCGGTTGATA GCCGCACCTG TCAGCCGTTC GGGTTGCTGC ATGGCGGCGC CTCGGTCACG 
TTGGCGGAGT CGCTGGGGTC GATCGCCGGC TATCTGTGCA CCGAGGGTGA ACAGCGCGTC 
GTCGGGGTAG AAATTAACGC CAATCATCTG CGGGCGGTAA CGGGAGGCGA AGTACACGGC 
GTCTGTCGTG CAGTGCATGC CGGGCGGCGT TTACAAGTCT GGCAAATTGA TATTTTTGAC 
GACCAGGCTC GCCTCTGCTG CACTTCTCGC TTGACGACGG CGGTACTCAC GCCGGAAGGA 
TAA 

 

Protein sequence

MIWKRSIDLE QLNQMSVGCM VGHLGIRMTN LTDDTIEAVM PVDSRTCQPF GLLHGGASVT 
LAESLGSIAG YLCTEGEQRV VGVEINANHL RAVTGGEVHG VCRAVHAGRR LQVWQIDIFD 
DQARLCCTSR LTTAVLTPEG