Gene Dd703_1625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1625 
Symbol 
ID8090219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1914389 
End bp1915390 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content62% 
IMG OID644835708 
Productvtamin B12-transporter permease 
Protein accessionYP_002987244 
Protein GI242239063 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4139] ABC-type cobalamin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCCAG TCGGCGTAAG TTATTCCCAA TTGAAGCAGC GGCAGCGTCG ACGCGATCGT 
CAGCGTGTGT TCGGGCTGGC GCTGATCGCG TTGTTGGTCT TGTTGGTCAG CCTGTGCGCG
GGCGATCGCT GGATATGGCC GACACGGTGG CTGGAATCGG ATGCGTCGCT GTTTTTATGG
CAGTTGCGCC TGCCGCGTAC CATCGCCGTT ATGCTGGTGG GCGCCAGCCT GGCGATGGGA
GGCGCGGTGA TGCAGGCATT GTTTGATAAT CCGCTGGCCG AGCCGGGATT GTTGGGCATC
TCCAGCGGCG CGGGTGTCGC TATGGTGTTG GCGGTACTGG TCGGTCAAGG CGCGGTGTCG
GTCTGGGGAT TGAGTCTCTG TGCTATCGCC GGCGCCATGC TGATTACGCT TGTGCTACTG
CGAATCGCCA GAACCCGGGT ATCGAACGCC AGATTACTGC TGACCGGCGT GGCATTCGGC
ATTATCTGCA GTGCGCTGAT GACCTGGGGT ATCTATTTCA GCACCAGCAT TGACCTGCGC
CAATTGATGT ACTGGATGAT GGGCGGTTTC AGCGGCGTCG ACTGGCGTCA GTCGGGCGTG
ATGTTGGCGC TGCTGCCGCC GTTGTTTTGG CTGGCGCGCC GGGGAGAGAT TCTCAATCAA
CTGGCGTTGG GTGAGATTGC CGCCCGGCAG TTGGGCGTCC CGGTGTTTTA CTGGCGTAAT
GTGCTGGTGC TGCTGATGGG GTACATGGTC GGACTCAGCG TCGCGCTGGC GGGTGTTATC
GGGTTTGTCG GTCTGGTCAT CCCGCATATT TTGCGCTTGT GCGGGCTGAC GGATCAGCGC
TATCTATTAA CCGGATGTGG TCTGGCCGGC GCCGCGGTGT TGATGCTGGC CGACACGGTG
GCGCGAACGA TGCTGGCGGC GGCGGAGTTG CCGGTCGGCG TCGTGACCGC CACGCTCGGT
GCGCCCTGGT TTATCTGGCT GTTGCTGCGC CGCCGGGCGT AA
 
Protein sequence
MQPVGVSYSQ LKQRQRRRDR QRVFGLALIA LLVLLVSLCA GDRWIWPTRW LESDASLFLW 
QLRLPRTIAV MLVGASLAMG GAVMQALFDN PLAEPGLLGI SSGAGVAMVL AVLVGQGAVS
VWGLSLCAIA GAMLITLVLL RIARTRVSNA RLLLTGVAFG IICSALMTWG IYFSTSIDLR
QLMYWMMGGF SGVDWRQSGV MLALLPPLFW LARRGEILNQ LALGEIAARQ LGVPVFYWRN
VLVLLMGYMV GLSVALAGVI GFVGLVIPHI LRLCGLTDQR YLLTGCGLAG AAVLMLADTV
ARTMLAAAEL PVGVVTATLG APWFIWLLLR RRA