Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1618 |
Symbol | |
ID | 8090212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 1908580 |
End bp | 1909782 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644835701 |
Product | outer membrane-specific lipoprotein transporter subunit LolC |
Protein accession | YP_002987237 |
Protein GI | 242239056 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAAC CTGTCGCGTT ATTTATCGGT TTGCGCTACA TGCGCGGCCG CGCCGCCGAT CGTTTCGGAC GGTTTGTATC CTGGCTTTCC GCTATCGGTA TCACTCTCGG CGTGATGGCG CTGGTCACTG TGCTTTCGGT GATGAATGGT TTTGAACAGG ATCTCGAAGA CAGCATTCTG GGGCTGATGC CGCAGGCGCT GATCACCACG CCCCAGGGGT TTCTTGACCC GCAAACGCTT CCCGCCCCGA CGCTGAATGC GCTCAAAGGC GTCACACAGA TTACGCCGTT GACCACCGGC GACGTGGTAT TGCAGAGCGC CCGCAGCGTG GCGGTGGGGG TGATGCTCGG CGTCAATCCG GAACAGCCGG AGCCGCTGGC GCGCTATCTG GTTAACGCCA GTATGCAAGC GCTGAAACCG GGGGATTATC AGGTGATCCT CGGCGAGCAA TTAGCCGCAC AACTGGATGT TAAGCGCGGC GATCAACTGC GGCTGATGGT GACTAGCGCC AGCCAACTGA CGCCGATGGG CCGTATTCCC AGCCAACGTC TGTTTACCGT TGCGGGCACC TTTTACGCTC ACAGCGAGGT AGACGGTTAT CAATTGTTGG TTAATCAGCA GGATGCCTCA CGATTGATGC GCTACCCGGC GGGGAATATT ACCGGTTGGC GCTTGTCGCT GGCGCAACCG CTGGCGGTGG ATGTCCTGGC GCGTCAATCC CTGCCGCAGG GGACGGTGTG GAAAGACTGG CGCGAGCGCA AAGGCGAGCT GTTTCAGGCG GTGCGGATGG AGAAGAACAT GATGGGGCTG TTACTGAGCC TGATTGTGGC CGTCGCCGCG TTCAACATTA TTACTTCACT GGGATTGCTG GTGATGGAAA AGCAGGGCGA GGTCGCGATC CTGCAGACGC AGGGGCTGAC CCGGCGTCAG ATCATGACGG TGTTCATGGT GCAAGGCGGT AGCGCCGGCG TGACCGGCGC GTTGTTGGGC GCGTTGCTGG GCGTGGCGCT GGCCAGTCAG CTCAATACGC TGATGCCGGT GTTAGGGTTG CTGATCGATG GCGGTTCGCT GCCGGTGCAG ATCCAACCGT TGCAGGTGGC TGGCATTGCG CTGGTGGCCA TGCTGCTGGC GTTGCTCTCC ACGCTTTATC CTTCCTGGCG CGCCGCCGCC GTCCATCCCG CAGAGGCTTT ACGTTATGAA TAA
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Protein sequence | MYQPVALFIG LRYMRGRAAD RFGRFVSWLS AIGITLGVMA LVTVLSVMNG FEQDLEDSIL GLMPQALITT PQGFLDPQTL PAPTLNALKG VTQITPLTTG DVVLQSARSV AVGVMLGVNP EQPEPLARYL VNASMQALKP GDYQVILGEQ LAAQLDVKRG DQLRLMVTSA SQLTPMGRIP SQRLFTVAGT FYAHSEVDGY QLLVNQQDAS RLMRYPAGNI TGWRLSLAQP LAVDVLARQS LPQGTVWKDW RERKGELFQA VRMEKNMMGL LLSLIVAVAA FNIITSLGLL VMEKQGEVAI LQTQGLTRRQ IMTVFMVQGG SAGVTGALLG ALLGVALASQ LNTLMPVLGL LIDGGSLPVQ IQPLQVAGIA LVAMLLALLS TLYPSWRAAA VHPAEALRYE
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