Gene Dd703_1536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1536 
Symbol 
ID8090129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1818823 
End bp1820322 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content47% 
IMG OID644835621 
Productflagellar hook-associated 2 domain protein 
Protein accessionYP_002987158 
Protein GI242238977 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.885136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGA CAACGAGTAG TACGAGTTCA TCAACCAGTA CTAGCACATC GACAAGCAGC 
TCAGGACTGG TATCTTCGCT TGGCGTTGGT TCGGGTCTTG ACTTGAGTTC TCTGTTGGAG
TCTCTGCAAG AAGTCGAAGA TCAGAAACTT ACGGCGATTA CGACTAAACA GACCAGTTAT
GAAGCGAAGT TGACGGCCTA CGGTACGCTG CAAAGTGCGC TGGAGACGTT TTCAACCGCG
ACGGAAGCAC TGTCGGATAG TTCGCTTTAT ACAACGAAAA AAACGTCAAC AAACACATCC
TTCACGGCTA CTGCTGAATC AACTGCTTCA ACTGGCAGCT ATTCTGTTCA GGTCACTCAG
TTGGCAACCG CCCAGACATT GGCGAGTGCA ACGCAAAGCA GTAAAACTAC CGAACTGGGC
GATAGCAGCC TGAGCAGTCG CACAGTGACG ATTACAGTGG GTAGTAATAC AGCAGTTAAT
GTCACGCTGA CAAATTCTCA AACTACTCTC TCGGGGATTG CCAGTGCGAT TAACTCAGCT
AAGGCTGGTG TAACGGCGAG TATTATTCAA TCGGGTGATA GCAGTTATCA GTTGACTCTG
ACTTCTGACG ACACTGGTGA AGCGTCAACC TTTACCGTCA GCAGCGATGA TACGACGTTA
AACGGTATCA TCGGATATGA TGGTGATAGC ACGTCCACAT CGAATGGGAT GACGGAACAG
GTTGCCGCAC AGAATGCGAA GCTAACGGTT AACGGTATTT CCATTGAGCG AAGCAGCAAT
ACTGTCACGG ATGTTCCTGC GGAAGGCGTA ACGCTTGAAC TTTCTTCGGT GTCTTCATCT
GCCGAAACGT TGACCGTCAG CAAGAGCATC ACGGATGCAG TGAGTGCAGT GAGCGATTGG
GTTGATGCCT ACAATACATT GCTCAGTTCC TTTGCCACTT TATCGAAATA TACGTCGGTT
GACGCTGGTG AGTCGCAATC TAGTGATAAT GGCGCATTGG TTGGTGATTC AGTCCTTAGT
TCAATTAAAA CCCAACTTAA GTCATTGCTG AGCCATGCTC AAAGCAGCGA TACGTACAAA
GTAATCACGC AACTCGGTAT ATCCATTGAG TCGTCTTCGA AAGATGACAA TGACAATACC
ATTTACGGTA CCTTGTCGCT TGACGACGAG ACATTAATCA ATGCGTTGAC TGAAGATGCG
TCTGCAGTAT CGGATTTCTT TGTAGGGAAT GGCAAAACCA CAGGCCTGGC AACCCAGATG
GTTTCGGCTA TTTCAACCTA TACCGACGAC GACGGGGTGA TTGATGGCGC GGAGGAAGGC
GTCCAGTCGA TTATTGATAA ATTGGCGGAT AACTATACAG CCACTCAGAG CCAGATTGAA
ACCAGAATGG CGCGTTATAA AAAACAGTTT GTGGCATTGG ATGTTCTGGT ATCTGAACTT
AATTCTACCT CAGATACGCT GACATCTATG TTCGACCAGC TGACGAGTTC CAGCAGTTAA
 
Protein sequence
MATTTSSTSS STSTSTSTSS SGLVSSLGVG SGLDLSSLLE SLQEVEDQKL TAITTKQTSY 
EAKLTAYGTL QSALETFSTA TEALSDSSLY TTKKTSTNTS FTATAESTAS TGSYSVQVTQ
LATAQTLASA TQSSKTTELG DSSLSSRTVT ITVGSNTAVN VTLTNSQTTL SGIASAINSA
KAGVTASIIQ SGDSSYQLTL TSDDTGEAST FTVSSDDTTL NGIIGYDGDS TSTSNGMTEQ
VAAQNAKLTV NGISIERSSN TVTDVPAEGV TLELSSVSSS AETLTVSKSI TDAVSAVSDW
VDAYNTLLSS FATLSKYTSV DAGESQSSDN GALVGDSVLS SIKTQLKSLL SHAQSSDTYK
VITQLGISIE SSSKDDNDNT IYGTLSLDDE TLINALTEDA SAVSDFFVGN GKTTGLATQM
VSAISTYTDD DGVIDGAEEG VQSIIDKLAD NYTATQSQIE TRMARYKKQF VALDVLVSEL
NSTSDTLTSM FDQLTSSSS