Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1472 |
Symbol | |
ID | 8088200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 1744182 |
End bp | 1745408 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644835555 |
Product | general secretion pathway protein F |
Protein accession | YP_002987094 |
Protein GI | 242238913 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.655662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCTGT TCCAGTATCA GGCATTGAAT GCACAAGGGA AAAAGTGCCA GGGCATGCAG GAGGCGGATT CCGCGCGCCT TGCCCGTCAA TTGCTGAGGG AAAAAGGGCT GATGCCGGTC AACGTCGAGG AACAGCGCGG CGAAGCGGCG CTGCGTGGCA ACGGGTCATT CTCGTTACGT CGGGCTCACC GAATCAGCGC CAGCGATTTG GCATTGTTGA CTCGGCAGTT GGCGACGCTG GTTGCAGCGG CGCTGCCGCT GGAAGAGGCG CTGGATGCCG TGGCCAGACA GAGTGAAAAA CCCAGGCTGC GGGCGCTGAT GGCGGCGGTG CGGGCTAAGG TGGTGGAAGG TCACTCGCTG GCGGAGGCGA TGGGAAATTT CCCCAACAGC TTCGAACGCC TGTATTGCGC GATGGTAGCG GCCGGCGAAG CGTCGGGCCA TCTGGATGCT GTGCTGAATC GTCTGGCGGA CTATACCGAA CAACGCCAGC AGATGCGCAG CCGCATTCAA CAGGCCATGA TTTATCCCTG TGTCCTGACG CTGGTGGCGG TGGCCGTCGT CAGTATTCTG CTCTCCGCCG TGGTGCCGAA AGTCGTCGAG CAGTTCATCC ATATGAAGCA AGCATTGCCG TTATCGACCC GTCTGCTGAT GAGCGTCAGC GATGCGGTGC GGACGTTTGG TCCCTGGGCG CTGCTGGCGT TGGTTTTGAC TATCATGGGC GCGCGCGTGC TGTTAAGGGA AGAAAAGCGC CGGATTGTGT TTCATCGCCG TCTGTTATTT CTCCCGGTGG TCGGCCGCAT CGCACGCGGG CTGAATACCG CCCGTTATGC CCGAACCCTC AGTATTCTTA ATTCCAGCGC CGTCCCTCTG CTGCAAGCCA TGCGCATCAG CGGCGACGTG CTGACCAACG ACTATGCCCG TTTCCGTTTG GGGCAGGCGA CCGACGCCGT GCGGGAAGGG GTTAGCCTCA ATAAAGCGCT GGAGCAGACC GCGCTGTTTC CCCCGATGAT GCGGCACATG ATTGCCAGCG GCGAACGCAG CGGCGAGCTT GACGACATGC TATCCCGCGC CGCGGATAAC CAGGATCGCG AGTTCAGTGC CCAGATGACA TTGGCGCTCG GGCTGTTTGA GCCGCTGCTG GTGGTGAGCA TGGCGGGCAT CGTGCTGTTT ATCGTACTGG CCATTCTTCA GCCGATTTTG CAACTGAATA CCCTGATGAG CATGTAG
|
Protein sequence | MALFQYQALN AQGKKCQGMQ EADSARLARQ LLREKGLMPV NVEEQRGEAA LRGNGSFSLR RAHRISASDL ALLTRQLATL VAAALPLEEA LDAVARQSEK PRLRALMAAV RAKVVEGHSL AEAMGNFPNS FERLYCAMVA AGEASGHLDA VLNRLADYTE QRQQMRSRIQ QAMIYPCVLT LVAVAVVSIL LSAVVPKVVE QFIHMKQALP LSTRLLMSVS DAVRTFGPWA LLALVLTIMG ARVLLREEKR RIVFHRRLLF LPVVGRIARG LNTARYARTL SILNSSAVPL LQAMRISGDV LTNDYARFRL GQATDAVREG VSLNKALEQT ALFPPMMRHM IASGERSGEL DDMLSRAADN QDREFSAQMT LALGLFEPLL VVSMAGIVLF IVLAILQPIL QLNTLMSM
|
| |