| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1363 |
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| Symbol | |
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| ID | 8087925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 1561187 |
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| End bp | 1562644 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644835444 |
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| Product | putative sigma54 specific transcriptional regulator |
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| Protein accession | YP_002986987 |
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| Protein GI | 242238806 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.918013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGG CAGAGATGAT AGAAAGCGAC ATTAACTACA AAGAGATCCT GGATAACCTG
GAGTGTCCCA TCTATGTCAC CGATGCCAGG GGGATCACCC GTTATGTCAA CCGCGCCTAT
ATTGCGGAGA ATCCCATGTG GGATCCGGAG CACCTTATCG GCCGCAACGT TCGGGACATC
ATCAAAGAAG GGAAATGCTT CTCGCAAGCC ATCACCCCCA AGGTGTTGCA AGAGCGGCGG
GAGGCGTTCG AATTGCTCAG CCACCCATTG CTGCCGGGGA AAAGCGCCTT TGTTTCCGGC
CGTCCCATCT ACGACCAGCA CCGGGCCCTG AAACATGTGG TATCGATCCT CTATGTGGAC
TCTTTTTTTC AGCGTCTGCA CACTCACTTT AACTACCCGT TGCGTCAGAT CTGCTCATTG
GGGAAAGTCC CTTCCCAGGC CACGCTAACC GGCGATACGT TGCCGATCCC GCTGATCGGC
CGCAGCGATA CCCTCAAGCG CATCCGAACA CTGTTAACCC GAATAGCGCC CACTAACGTA
CCGGTGTTAA TCACCGGCGA ATCGGGCACC GGCAAAGAAG TGATCGCCAG CGCCATCCAA
CGGTTCAGCG CGCGCGCCGA CAAGCCGTTT ATCAAGGTCA ACTGCGCCGC CATCCCGACC
AGCCTGCTGG AAAGCGAGCT GTTCGGCTAC GACAAAGGCG CGTTCACCGG TGCGACCCCC
CAGGGGAAGG CGGGCTTTTT TGAACAAGCC AACGGAGGGA CGCTGTTTCT CGACGAAATC
GGCGAGCTGC CGTGGGAAGC GCAGGCCAAA CTCCTGCGCG TGCTGCAACA TCAGGAAATT
CAGCGGCTGG GCAGCACTCG CAGCATCATG CTGGATGTGC GGATCATCGC CGCCACCAAC
GCCAGCCTGC AGGAAAAAAT TCAGCAACGG CTGTTTCGCA GCGATCTCTA TTACCGGTTG
AGCATCATCC CGCTGCATCT GCCGCCGCTG CGTGAGAGAC CTGAAGACAT CCCGTTGCTG
ATCGAGTTTT TTTCCGGGGT GTTCGACCAG CAGTACCAGC GCATCATCCG CTTCGATGCA
GACGGCATCG ACCGCCTGAA GCGCCATGTC TGGCCCGGCA ATGTGCGGGA GCTGCGCAAC
TTTCTGGAGT ACATGTACAT CTGCGCCGAA GAAAATTTCG TCGATATCAC GACTATCGAA
CACTGGTTGC TCGGCAACCG TACCGAGCAA CCGACGGACA CGTCGTCGCA GTGCCCCGCC
AGCGAACTGG AGAGCTTCTG CCAGTCCATG CTGGAAATGG ACGTGCCGCT GAAAACCATT
ATCGACGAGG TGGAACGGTG CGTGCTGCGC CAGTCGCTGG CGACTCACAA AACCACCTAC
GCCGTGGCGA AAAAGCTGGG CGTGGCGCAA CCCACCATCG TGCGCAAACT CCACGGGCAC
AACCTGCGCC CGGAATAA
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| Protein sequence | MKMAEMIESD INYKEILDNL ECPIYVTDAR GITRYVNRAY IAENPMWDPE HLIGRNVRDI
IKEGKCFSQA ITPKVLQERR EAFELLSHPL LPGKSAFVSG RPIYDQHRAL KHVVSILYVD
SFFQRLHTHF NYPLRQICSL GKVPSQATLT GDTLPIPLIG RSDTLKRIRT LLTRIAPTNV
PVLITGESGT GKEVIASAIQ RFSARADKPF IKVNCAAIPT SLLESELFGY DKGAFTGATP
QGKAGFFEQA NGGTLFLDEI GELPWEAQAK LLRVLQHQEI QRLGSTRSIM LDVRIIAATN
ASLQEKIQQR LFRSDLYYRL SIIPLHLPPL RERPEDIPLL IEFFSGVFDQ QYQRIIRFDA
DGIDRLKRHV WPGNVRELRN FLEYMYICAE ENFVDITTIE HWLLGNRTEQ PTDTSSQCPA
SELESFCQSM LEMDVPLKTI IDEVERCVLR QSLATHKTTY AVAKKLGVAQ PTIVRKLHGH
NLRPE
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