Gene Dd703_1320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1320 
Symbol 
ID8087882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1507487 
End bp1508419 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content56% 
IMG OID644835401 
Productphosphonate ABC transporter, periplasmic phosphonate binding protein 
Protein accessionYP_002986944 
Protein GI242238763 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
[TIGR03431] phosphonate ABC transporter, periplasmic phosphonate binding protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAA ATATCGTGAT GACTACGCTG CTGGCGGGTG CGGTACTGAC CGCCGGTTCT 
TTTGCTCAGG CTGCGCCGCG GGAGCTGAAT CTGGGAATTC TGGGCGGCCA GAATGCGACC
CAGCAGATCG GCGATAACCA GTGTGTGAAA CAGTTTCTGG ACAAAGAACT GAATGTGGAT
ACCCAGCTGC GCAACGCTTC CGATTACGCT GGGGTGATCC AGGGGCTGCT GGGCAAGAAG
ATCGATCTGG TATTGAGCAT GTCGCCGTCC TCGTTCGCCT CGGTCTACCT CAAGGATCCG
AACGCGGTGG ATGTGATGGG GATCGTGGTG GATGACGCCG ACCAGTCGCG CGGTTATCAC
TCGGTGGTGG TGGTCAAGGC GGACAGCCCG TACCAGAAGC TGGAAGATCT GAAAGGCAAA
GCGTTCGGTT TTGCCGACCC GGATTCTACC TCCGGCTACC TGATCCCCAA CCATGCGTTT
AAAGAGAAAT TCGGCGGCTC GCCGGACGAT AAATACAACA ACTTCTTTTC CAGCGTGACC
TTCTCCGGCG GCCATGAGCA GGACATTCTC GGGGTGCTGA ACGGCCAGTT CGATGGCGCA
GTGACCTGGG CATCCATGAT CGGCGATTAC AACAGCGGTT ACACCAGCGG CGCGTTCGGC
CGGCTGATTC GCATGGATCA TCCGGATTTG ATGAAGCAAA TCCGTATCAT CTGGCAATCG
CCGTTGATCC CGAACGGCCC GGTGTTGGTG AGCAATGCGT TGCCGGCGGA TCTTAAAACC
AAGCTTATCG CCGCGGTACA CAAACTGGAT AAGGAAGACC ACGCCTGCTT CGTGAAGGCG
GTGGGCGGCA AGCAACACAT CGGCCCAGCC ACGGTCGATG ATTACAAAAC CATCATCGAT
ATGAAGCGTG AACTGACCAA AGGCAACCGC TAA
 
Protein sequence
MKKNIVMTTL LAGAVLTAGS FAQAAPRELN LGILGGQNAT QQIGDNQCVK QFLDKELNVD 
TQLRNASDYA GVIQGLLGKK IDLVLSMSPS SFASVYLKDP NAVDVMGIVV DDADQSRGYH
SVVVVKADSP YQKLEDLKGK AFGFADPDST SGYLIPNHAF KEKFGGSPDD KYNNFFSSVT
FSGGHEQDIL GVLNGQFDGA VTWASMIGDY NSGYTSGAFG RLIRMDHPDL MKQIRIIWQS
PLIPNGPVLV SNALPADLKT KLIAAVHKLD KEDHACFVKA VGGKQHIGPA TVDDYKTIID
MKRELTKGNR