| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1248 |
|---|
| Symbol | |
|---|
| ID | 8087809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1430442 |
|---|
| End bp | 1431290 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644835330 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002986874 |
|---|
| Protein GI | 242238693 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGA AAGTGTGGTT TATCACCGGC GCTTCCCGTG GGTTCGGCCG AGTCTGGACG
GAAGCCGCGC TATCCCGAGG GTACCGGGTT GTCGCCACCG CCCGGAATGT GGCGACACTC
AATGATTTCA ACGAGAAGTA CGGCGACCGC GTCTTGACGC TGCCGCTGGA TGTCACGGAT
GACGCGCAGG TCAGGCAAGC CGTCGACACC GCCTGTCAGC ATTTTGGCCG GCTTGATGTG
GTGCTCAACA ATGCGGGATA TGCCCTGGTC GGCGCCATAG AAGAAGTTCC GGTCACATCG
GTCAAAGCCG AATTTGATAC CAATTTCTTC GGTCCTCTGC ACGTGATTCA GGCGGTACTC
CCGGTACTGC GCAAACAGCA AAGCGGACAC ATTATCAGCG TGTCGAGCGT GGCAGGGCTG
GTAGCCGGCC CGGTGTCAGG GCTTTACCAT TCGTCGAAAT GGGCCGTAGA AGCGTTGCAT
GAAAGCCTTT CTCATGAGGT GAGTGAATTC GGCATCCGGG TCACGCTGCT GGAACCTGGC
GCTTATGCCA CTGAATTCGC CAGCCAGACT TCGCTGGATA TCGCTCAGGG CATCGACGCT
TATGCGACCA TCCGGCAGCG GGTTTTCGCT CATAGCGCTG AAATAGAATT TGGGGAACCT
GCCGCCACGG CGGACATCGT ACTGAAAATA GTCGAGACGC CCTGCCCTCC GCTGCGCGTA
TTCCTGGGCA CAGAAGGGTT GCCCGCAGTG AAAGCCGCTT ACACCCGACG GCTTGCCGAA
TGGGAAGAAT GGCAGGGCGT TGCCGCAGCG GCACAAGGAA ACTCCGTAAA ACAATCCCTC
GAGTTGTAA
|
|---|
| Protein sequence | MTEKVWFITG ASRGFGRVWT EAALSRGYRV VATARNVATL NDFNEKYGDR VLTLPLDVTD
DAQVRQAVDT ACQHFGRLDV VLNNAGYALV GAIEEVPVTS VKAEFDTNFF GPLHVIQAVL
PVLRKQQSGH IISVSSVAGL VAGPVSGLYH SSKWAVEALH ESLSHEVSEF GIRVTLLEPG
AYATEFASQT SLDIAQGIDA YATIRQRVFA HSAEIEFGEP AATADIVLKI VETPCPPLRV
FLGTEGLPAV KAAYTRRLAE WEEWQGVAAA AQGNSVKQSL EL
|
|---|
| |