| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1225 |
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| Symbol | |
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| ID | 8087786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 1403771 |
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| End bp | 1406728 |
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| Gene Length | 2958 bp |
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| Protein Length | 985 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644835307 |
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| Product | diguanylate cyclase with beta propeller sensor |
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| Protein accession | YP_002986851 |
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| Protein GI | 242238670 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3292] Predicted periplasmic ligand-binding sensor domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.90661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAC GCATTGGCAT TTTCGCTGCT TACACACGCA TTCTGTTTTA TGGTCTGACA
CTATTTTATG GTCTGACAAT GTTTCTCAGC GGGACGGCAT GGGCACAGGA TGCCCGTATT
CCGCTTAGTG AGTATTTCTT TGAAACCTGG TCGACAAAAG ACGGCCTGCC ACACAACAGC
ATTAACGCCA TCGCACAAAC ACGGGAAGGG TATCTGTGGT TCGGCACCTG GGAAGGCTTT
GCCCGCTATA ACGGCCAGAG TTTCCGCCTG TTTGAACGCG GCGCCGAAAC CGGATTGCCC
GATTCGGGTA TTCAGGCGCT GATCGCGGAG CCGGACGGCG GCCTATTGGC GGCAGGCGCT
CGCGGCGGGC TGTCATCATA CCGGGACGAC ATCTGGCAAC CCTATGCGCC CGCCCCCACC
ATGATCAATT CCGTCATGCG CGACCAGGCC GGAAACCTGT GGATGACCAT GCCAGGGAGA
GGCGTCATCC TCCGTCCCGC CGCTGAAAAA AGCGCCGCGC AGGATCAGCA ATTTATCGAT
AACGTCACCG CCTACAGAAT CGTGGAAGAC GATAACGGCA CGGTTTGGGT CGCTACCGAC
AACGGCCTTT ATCAGGTGAT CGACCATAAA GCCGCGCTGG TTCCACTTGC CAGCGGTTTA
CCGCACGTTC GCGTGTTCAG CCTGCTCGTC ACCCGCGACG GCACACTGTT GGTCGGCACC
GAAAAAGGCG TATGGAAACG CGACGGTCAG AATTTCACGT TGTTGCATCC CGCATTAGCC
GGTGAAGTGG TGTCCGCCAT GTTGCAGGAT AACCAGCAGG ATACCTGGTT CGGCACCATC
AACCACGGTG TCTTCCGGCT CAGCCCGGCG GGGCTTGAGC AGCTCAACAT CGATAGCGGC
ATTATTCGTA ACCGCGTACA GGTTATGTTG CAGGATCGAG AGCAGAGCAT CTGGATTGGC
ACCAATTCAG GGTTGCTTCG CCTGCGGCGG GCGCCGTTTA TCACTATCGG TACACGTCAG
GGCCTGAACG GCGACTACAT CCGAACAGTG ATGGCGCATT CCGATGGTAG CCTGTGGGTC
GGCAGCAGCA CCGGCCTGAA CCGCATCAAT AATGGCCGGG TTGAGCAAAT CAACTGGGGC
GAACACACCC AACCATCGGT ACTTAGCCTG GGAGAAGCCA GGGACGGTAG CGTGTGGATC
GGTACCTATA CCGACGGCCT ATTACGCTGG AAAAACGGGC AGCTAACCGC CGTCTTACGG
CAAAACGACG GTCTGCCCAG CAACGAAATA CGTTCAATCA TCACCGACAG CCAACAAAAC
CTGTGGATCG GCACGGCGTC AGGGCTCAGC GTATGGCGCA CTGACGGCAC GATACATAAT
TATACCGCCG ACGATGGTCT GCCCGCCGGC TTCATCATGG CATTGCAGGA AGATGAACAG
CATCGCATTT GGGTCGGAAC CGGTATCGGC GTTTCTGTTT TCAGCGACGG CAAATTCCAC
AAAATCGATA TTTCCGGCAT GGACAACGCG GAGTATGTCT TCGGTTTCTA CAGTGAACCC
GGCTATATGT GGATGACGAC CGATCGTGGT CTCATTCGTT ACCGCTTTCG GGATGGCGCC
ATCGGCATGG TTGGACGCAA AGCCGGCCTT CCTATCGACA AGCTGTTTCA GGTCACGCCT
GATCATCTGG GTTATTTCTG GCTAAGCTCT AACCGCGGCA TGATACGTAT ACGCCAGGAT
GATGCCCGGG ATGTGGTGGA AGGCAAGAAG CGGAAACTCA CCACTCAGCA ACACTTCGGT
GAAAGCGACG GTATGGTCAG CGCGCAGGCC AACGGCGGTT CGACGCCTGC CGCCACCGTC
GACCAGAACG GCAGCATTTG GATAGCCACC GCCAGAGGTG CGGCAATGGT GCATCCTGAA
AGTTTGCCCG ATTTCGGCAA AACCCGGCTG ACGGCGGTGA TCGAATCCGT CGACGGCAAC
CACAAACCCA CTCGTGAGCA CGATGGCCTC GTGTTCCCCG CCGGAACCAC TCGCATCCGC
ATCAACTATT CGGGGCTGGG CTATGTGCTT CCCACCCGTA TTCTCTATCG CACCCGGCTG
GAAGGTTTCG ATCCGCAATG GATCGACAGA GGTAACGATA CATCGGCGGA ATACACCAAC
CTGCCGCCGG GCGTCTACCG CTTCCGCGTG ACCGCCAGTT ACCCTTATGG CGAGTGGAAC
GGGGCCGACA CCGTCGTCAA TCTGCGTATT GAGTCCTTTA TCTGGCAACG TTCTTCCTTC
CAGGGGCTGC TGGCGCTGAC GCTGTTGCTG ACGTTGCTGC TGCTGTTTCG CTGGCGGCTG
GGTCTGGCGC GCCGCAACGA GGCGCGCTTA CGTGATCTGG TCGCCGTGAA AACGCTGGCA
TTGCAGGAGC AGGCTGAGGC GTTTGAACGC CAGGCCAGAG AAGATCAACT GACCAAGCTG
GATAACCGCC GGGTATTCGA CGAACAGTTG ATACGCTGTT TTGAAGACTC ACAACGTCAC
GATTACCCGT TAACGCTGGC TATCTTCGAC ATTGACCATT TCAAACAAAT CAACGACCGC
TGGTCGCATG TGGTCGGCGA CAAAGTGTTG CAAACCATTG CCGATATCCT GCGAAATTTT
CATCAGGATG CAATGCTGAT CGCCCGTTGG GGCGGCGAGG AGTTCACCTT GCTGTTTCCC
CGGATGACGG TCGAACAGGC GGCGGCGGTA TGCGAATCGC TGCGACTGGC GCTGACTAAA
GCCGACTATC AGACCATCGC CGACGGGTTG AGCGTGACCG CCAGTTTCGG GCTGTGTGAT
TCATTCACCG CCAAAGACAG CCAGGAGCTG ATAAGACAAG CCGATCATGC GTTATATCTC
GCCAAACAAA CCGGCAGAAA CAAGGTGGTG TGCTGGTCAG ATGGAAGCCA TGTCGCTACC
GATCATTTCC ACATCTGA
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| Protein sequence | MYKRIGIFAA YTRILFYGLT LFYGLTMFLS GTAWAQDARI PLSEYFFETW STKDGLPHNS
INAIAQTREG YLWFGTWEGF ARYNGQSFRL FERGAETGLP DSGIQALIAE PDGGLLAAGA
RGGLSSYRDD IWQPYAPAPT MINSVMRDQA GNLWMTMPGR GVILRPAAEK SAAQDQQFID
NVTAYRIVED DNGTVWVATD NGLYQVIDHK AALVPLASGL PHVRVFSLLV TRDGTLLVGT
EKGVWKRDGQ NFTLLHPALA GEVVSAMLQD NQQDTWFGTI NHGVFRLSPA GLEQLNIDSG
IIRNRVQVML QDREQSIWIG TNSGLLRLRR APFITIGTRQ GLNGDYIRTV MAHSDGSLWV
GSSTGLNRIN NGRVEQINWG EHTQPSVLSL GEARDGSVWI GTYTDGLLRW KNGQLTAVLR
QNDGLPSNEI RSIITDSQQN LWIGTASGLS VWRTDGTIHN YTADDGLPAG FIMALQEDEQ
HRIWVGTGIG VSVFSDGKFH KIDISGMDNA EYVFGFYSEP GYMWMTTDRG LIRYRFRDGA
IGMVGRKAGL PIDKLFQVTP DHLGYFWLSS NRGMIRIRQD DARDVVEGKK RKLTTQQHFG
ESDGMVSAQA NGGSTPAATV DQNGSIWIAT ARGAAMVHPE SLPDFGKTRL TAVIESVDGN
HKPTREHDGL VFPAGTTRIR INYSGLGYVL PTRILYRTRL EGFDPQWIDR GNDTSAEYTN
LPPGVYRFRV TASYPYGEWN GADTVVNLRI ESFIWQRSSF QGLLALTLLL TLLLLFRWRL
GLARRNEARL RDLVAVKTLA LQEQAEAFER QAREDQLTKL DNRRVFDEQL IRCFEDSQRH
DYPLTLAIFD IDHFKQINDR WSHVVGDKVL QTIADILRNF HQDAMLIARW GGEEFTLLFP
RMTVEQAAAV CESLRLALTK ADYQTIADGL SVTASFGLCD SFTAKDSQEL IRQADHALYL
AKQTGRNKVV CWSDGSHVAT DHFHI
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