| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1224 |
|---|
| Symbol | |
|---|
| ID | 8087785 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1402488 |
|---|
| End bp | 1403567 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644835306 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_002986850 |
|---|
| Protein GI | 242238669 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.988641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCAAACGC TACCGTACTA CTCTCCTGAT ACAGATCATT TGAAGCTACG GGCTTTCCGC
TTCATCCGGC GCATGTTTCT TATGCGTCAG CTCGGCACGT TTCTGTGCTT TTTCCCCATC
GCTTCCGTAC TGTATGAATT ATCCCGCAGT TGGCCGCTGT TCTTGCTGCT GGTGCTCAAT
GCTTTCGTCT GGCCGCATAT TGCCTATGCC GTCTCCTCGC ACGCACGGGA TCCGGTAAAA
GCCGAATTTA TTAATATGAC GCTGGATACC GCTTTCGGCG GCGCCTGGGT CGCCTTGATG
GGGGTGTGCC CGCTTCCATC GGCGATCATC ATCTCTATTC TGATCGCCGA CCGTTACGCC
GCCGGGGGCT GGAAGCTGCT GCGTATGTCG ACCGTCGCCT CTTTCGTTTC CTTTATCCTG
GTCTGGACAT TGCTGCGCTT CGAGCATTAC ACGGTATTGT CTGAACGCAC GCTCTGGTTG
ACGCTGCCGC TATCCACCAT TTACATGATC ACGCTCAGCG TGGTGTCTTA TCAGTTGGCG
GCACGGCTGC GTGAAAAAAG CCGGGAGCTG GAACGTATTA CCCTGATGGA TCCCTACCTC
AGCATTCCCA ATCGGCGGTT ATTCGAACAG CGCCTCGACA AAGAGTTTCT GCGGACACAA
CGCGGTGAAA GCCATGCGTA CCTGATGCTG ATTGATGTTG ATCATTTCAA GTACGTCAAC
GACAGTTACG GCCATGAAGC GGGGGATTAC CTGCTGACCG AAATTTCCGT GGTATTGCGC
AACATCGCCG GGAAATATGA TGTGCCCGCC AGATTCGGCG GTGATGAGTT AGGCATCATT
ATCCAAAACA GCACGGATAA AATCGTCACG ATGACGGCTC ACCAACTTCA TGCCAAAGTG
GCGACCATTC GCCTGCCCGC CGACCCGACC TTCTGTTGCA CCATCAGTAT CGGCATCGCC
AGAGCCGAAC ACGCCGCCAC CCCGCAAAGT TGGCTGAATA GCGCGGATCA AGCGCTCTAC
GCCGCTAAAA AGAGCGGCAA AAACCGCTTC CATATGATGG AACACGAGTC TGCGGCGTAA
|
|---|
| Protein sequence | MQTLPYYSPD TDHLKLRAFR FIRRMFLMRQ LGTFLCFFPI ASVLYELSRS WPLFLLLVLN
AFVWPHIAYA VSSHARDPVK AEFINMTLDT AFGGAWVALM GVCPLPSAII ISILIADRYA
AGGWKLLRMS TVASFVSFIL VWTLLRFEHY TVLSERTLWL TLPLSTIYMI TLSVVSYQLA
ARLREKSREL ERITLMDPYL SIPNRRLFEQ RLDKEFLRTQ RGESHAYLML IDVDHFKYVN
DSYGHEAGDY LLTEISVVLR NIAGKYDVPA RFGGDELGII IQNSTDKIVT MTAHQLHAKV
ATIRLPADPT FCCTISIGIA RAEHAATPQS WLNSADQALY AAKKSGKNRF HMMEHESAA
|
|---|
| |