Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1221 |
Symbol | |
ID | 8087782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 1398429 |
End bp | 1399988 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644835303 |
Product | diguanylate cyclase |
Protein accession | YP_002986847 |
Protein GI | 242238666 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCATCGA ATAATCCTCC CCCTATGCAT GTTAGCCGCT TTTTGCTCCT GTTCCGGCGT TTTTCGTCAC CGGGCATCAC CATGATGGGA TTTTTAGTGA TGTTGGGGCT GATATTCTGC GTCACCAGCG TCTGGAACTT CTGGACTTCT TATCTGCACC GTCTGGATGA AGCAGAAGAT AATGTGATCA ACTTATCATT CGCGATGTCG CGTCAGGCCG AGGATACCTT CGTCCCAGTC GAAGTCGCCA TTGACGATAT GCTACGGGAG TTTGCACAGA CCGGAATGCT GGACTCCAGC AAAGTGCGAA GCGTTCTCGA TACCCATCGG GCGGTGCTAC CACAATTGGT GGGGTTTTAT TTGTTTGATG AAAGAGGAAA TCTGGTTTCC TCCACCGCCA AAGGGCCGCT CTATATTTAT AATGCAGGAC GAAGAGAATA TTTTCTTTGG CTCAAAGAAC ATAATACGTC GGCATTATAT ATTAGTCGGG TCAGTACCAG TTCAACGACC GGGCGGCATA TTATTCCTGT GGCGAAAAGA TTGACTGGCG AAAATGGCGA ATTCAAAGGT ATTTTTCTGG CGACCATCGA TCATAATTAT TTCGGTAATT TTTATCGTTA TTTTACGCTC GACTATAACA GCGTGTTATC ACTGATGAAT GCCGATGCCC ACGCTATTTT TATCTATCCC GATCCGGCCT CCTATATTAA TGACGACTTT ACGACCGGCG GATTGTTTGA CCAGCAACGT CAGCAACTCG CCAGCGGTAG CGGAACCTGG CGTACCACGC TGGATAATAA AGTGCGCATT GTGGGGTATG TCAGGCTTAA ACGTTATCCG CTGGTGGTGG CGGCCAGTGT GGAAAAAGCT GCGGTACAAC GACGCTGGCT GATGGAAAAT CTCCCGGCGA TGCTGCTGAA TGTGTTTGTG CTGTTTCCCA TACTTTTTAT GGGGGCGCTG GTGCTGAAAC AGATCCGGCT GACGGTCAGA AATAAGGACG TATTGACACG TTTACACCAG GAGGAAACCG ATAAAAATCG GGTTTTGCAA AAGCTGGCGT TGGTTGACCC GTTAACCAGG CTGGCGAATC GGCGTCGCTT CGACAGCTAT CTGGAGCAAT CACTGGAAAA AATGCGTGAC GAAGGCAAGG TGTTGTCGCT GATTATGATG GATGTGGATT TCTTCAAATA TTTTAACGAC ACCTATGGGC ATGTACGGGG CGATCGCTGT CTGTCGCAGA TCGGCAGTGT GCTGTTGGGA AGAGTCTGGC CATCCGGTGC GCTGCCGGCC CGCTATGGCG GCGAGGAGTT CGCGGTGATC CTACCCAATG TGACCGGCGA GCAGGCGGAG TTGCTGGGTG CACAGGTGGT TGAGGCGATA AGGGCATGCG CAATTCCGCA TCAAGAGTCC TTGCTGCCGG ATCACATTGT CACAGTGAGT GTCGGCGTTT ACTCCTTTTC CAGCGCCAAC CCCTGTGATG TGCAGCGTCT TAAGGATGGC GCTGATCAGG CCTTGTATCT GGCCAAGAAA AAAGGACGCA ATCAGTGTGT AAGGTTGTAG
|
Protein sequence | MPSNNPPPMH VSRFLLLFRR FSSPGITMMG FLVMLGLIFC VTSVWNFWTS YLHRLDEAED NVINLSFAMS RQAEDTFVPV EVAIDDMLRE FAQTGMLDSS KVRSVLDTHR AVLPQLVGFY LFDERGNLVS STAKGPLYIY NAGRREYFLW LKEHNTSALY ISRVSTSSTT GRHIIPVAKR LTGENGEFKG IFLATIDHNY FGNFYRYFTL DYNSVLSLMN ADAHAIFIYP DPASYINDDF TTGGLFDQQR QQLASGSGTW RTTLDNKVRI VGYVRLKRYP LVVAASVEKA AVQRRWLMEN LPAMLLNVFV LFPILFMGAL VLKQIRLTVR NKDVLTRLHQ EETDKNRVLQ KLALVDPLTR LANRRRFDSY LEQSLEKMRD EGKVLSLIMM DVDFFKYFND TYGHVRGDRC LSQIGSVLLG RVWPSGALPA RYGGEEFAVI LPNVTGEQAE LLGAQVVEAI RACAIPHQES LLPDHIVTVS VGVYSFSSAN PCDVQRLKDG ADQALYLAKK KGRNQCVRL
|
| |