Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd703_1142 |
Symbol | sdhA |
ID | 8087703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya dadantii Ech703 |
Kingdom | Bacteria |
Replicon accession | NC_012880 |
Strand | + |
Start bp | 1306290 |
End bp | 1308059 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644835224 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_002986769 |
Protein GI | 242238588 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.881943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAATT TGCCAGTCAG AGAGTTTGAT GCCGTTGTTG TTGGCGCGGG TGGCGCGGGT ATGCGCGCCG CGCTTCAGAT TTCCCAGATG GGCTTGTCCT GTGCCCTGTT GTCCAAAGTA TTCCCGACCC GTTCCCATAC GGTATCCGCC CAGGGGGGAA TTACTGTTGC TTTGGGCAAT ACCCATGAGG ACAATTGGGA ATGGCATATG TATGACACCG TAAAAGGGTC TGACTACATC GGTGATCAGG ACGCCATTGA ATATATGTGC AAAACGGGGC CGGAAGCGAT TCTGGAACTG GAACATATGG GATTGCCGTT TTCCCGCTTG GATGATGGGA GTATTTACCA GCGCCCGTTC GGCGGCCAGT CTAAGAATTT CGGCGGCGAG CAGGCTGCTC GCACTGCGGC GGCGGCAGAC CGTACTGGGC ACGCGCTGTT GCATACGCTT TATCAGCAGA ACCTTAAAAA TCACACCACC ATCTTTTCTG AATGGTATGC GCTTGATCTG GTGAAAAATC AGGATGGTGC GGTGGTGGGA TGTACCGCCA TCTGTATTGA AAGCGGCGAA GTCGTTTATT TCAAAGCTCG TGCCACCGTA TTGGCGACCG GCGGGGCCGG GCGCATCTAT CAGTCAACGA CCAATGCGCA TATCAATACC GGTGACGGTG TGGGTATGGC GCTGCGTGCA GGTGTGCCGG TTCAGGATAT GGAAATGTGG CAGTTCCATC CTACGGGGAT CGCTGGCGCT GGGGTACTGG TAACGGAAGG GTGCCGTGGT GAAGGCGGTT ACTTGCTTAA CAAACATGGC GAGCGTTTTA TGGAGCGCTA TGCGCCAAAC GCCAAAGATT TGGCTGGGCG TGATGTGGTC GCTCGTTCCA TCATGATTGA GATTCGTGAA GGCCGCGGAT GCGATGGTCC ATGGGGACCA CATGCCAAAC TGAAGCTGGA TCACCTTGGT AAAGAAGTTC TGGAGTCTCG TTTGCCGGGT ATTTTGGAGT TGTCGCGTAC TTTTGCCCAT GTTGATCCGG TCAAAGAGCC GATTCCGGTT ATTCCGACTT GCCACTATAT GATGGGCGGT ATCCCGACGA AGGTCACTGG TCAAGCGTTG ACGGTGAATG AAAAAGGCGA AGACGTGGTG ATTCCTGGTC TGTTCGCTGT GGGTGAGATT GCCTGCGTTT CTGTTCACGG TGCCAACCGA CTGGGCGGCA ACTCGTTGCT TGACCTGGTA GTGTTTGGTC GTTCGGCAGG GATGCATCTG CAGGAATCGT TGATTGAACA AGGCGTTTCC CGCGATGCCA GTGACTCGGA TATCGATGCA TCCCTTGAGC GTCTTAACCG TTGGAACGAT AACCGTTCTG GCGAAGATCC GGTTGAAATT CGCAAAGCAT TGCAGTCTTG TATGCAGAAT AACTTCTCGG TCTTCCGCGA AGGCGATGCG ATGGCAAAAG GCCTTGAAGA GCTCAAAGTG ATTCGCGAAC GCCTGAAACA GGCTCGATTG GATGATGCAT CAAGTGAATT CAATACCCAG CGTATTGAGT GCCTGGAGCT GGATAATCTG ATGGAAACTG CATATGCCAC CGCGGTCTCT GCGAATTTCC GCACTGAGAG TCGTGGCGCG CACAGTCGCT TCGACTATCC TGATCGTGAT GATGAGAATT GGTTGTGCCA TACGCTGTAT CAGCCGCAAA CCGAGAGCAT GACGCGCCGT CAGGTGAACA TGCAGCCTAA ATTGCGCCCG GCGTTTCCGC CGAAAGTGCG TACTTACTGA
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Protein sequence | MMNLPVREFD AVVVGAGGAG MRAALQISQM GLSCALLSKV FPTRSHTVSA QGGITVALGN THEDNWEWHM YDTVKGSDYI GDQDAIEYMC KTGPEAILEL EHMGLPFSRL DDGSIYQRPF GGQSKNFGGE QAARTAAAAD RTGHALLHTL YQQNLKNHTT IFSEWYALDL VKNQDGAVVG CTAICIESGE VVYFKARATV LATGGAGRIY QSTTNAHINT GDGVGMALRA GVPVQDMEMW QFHPTGIAGA GVLVTEGCRG EGGYLLNKHG ERFMERYAPN AKDLAGRDVV ARSIMIEIRE GRGCDGPWGP HAKLKLDHLG KEVLESRLPG ILELSRTFAH VDPVKEPIPV IPTCHYMMGG IPTKVTGQAL TVNEKGEDVV IPGLFAVGEI ACVSVHGANR LGGNSLLDLV VFGRSAGMHL QESLIEQGVS RDASDSDIDA SLERLNRWND NRSGEDPVEI RKALQSCMQN NFSVFREGDA MAKGLEELKV IRERLKQARL DDASSEFNTQ RIECLELDNL METAYATAVS ANFRTESRGA HSRFDYPDRD DENWLCHTLY QPQTESMTRR QVNMQPKLRP AFPPKVRTY
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