| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1090 |
|---|
| Symbol | |
|---|
| ID | 8087645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1248291 |
|---|
| End bp | 1249457 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644835166 |
|---|
| Product | rare lipoprotein A |
|---|
| Protein accession | YP_002986717 |
|---|
| Protein GI | 242238536 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0797] Lipoproteins |
|---|
| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.499967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAGG ATTGGCTTTG GATGGGGGCG CTCAGCCTGG TACTGGCGGG TTGTACGTCG
ACAGATCAAC AATCGCAAAC GCCGGCGTCC CAGACGGCAT ACAGCGGTCC GGTCGAAGAA
ATTCCCGGCG TCGAACCCCG TTACGAACCC TATAATCCGG CCAGCCTGCA GGATTACACC
GTTAACGACA AAAAATATCG CATTGTAAAA AACCCGGAAA ATTTCAGTGA AGCGGGATTT
GCCTCCTGGC AGAACCGCGG ATCAGCCGGC ACGCGCACCG CCATTGGCGA AGAGTTCAAT
CCCAATGCCT TTGCCGCTGC CCATCCTACG CTCCCTATTC CCAGTTATGT CCGAGTGACC
AACCTGAGCA ATGGGCGCCG TCTGGTGGTG CGTGTTAACG ATCGCGGGCC TTATACTCCA
GGCCGCATCA TCGATTTGAC GCGGGCGGCG GCCGATCGAC TCAACCTTTC CAACAACACT
AAAGTAAAAG TCGATTTCAT CAGCGTGGCG CCTGACGGCA CATTGTCCGG CCCCGGTACT
GTAGGCACTC GCGTTGCCCG ACAGAGTTTT GCGCTGCCGT CGCGCCCGGA TCTGGGTACC
AGTAGTTTGG GAACACCGAC GCTTTCCACC ACTACGCCGG AAGCCGCCGT CCGCCCGATA
AGTAACGCCA CGTTGACGCC TACCGCCCAA AACAGCACAT CCGTCGACAC AAGTACGATT
CCGTCATCAG GGAACATTCC GGTATCTGTC AGCGGCAGTC GTGGCGGTGG TTTTCTGAAA
TCCCCACAAC CGTTGCGCAG CGGGGTACTG GAAGGATCCG AGTCCGCCCC AGCTGTGAGT
CCTGCCGGCG CCACAGCGTC GGTTTCCAAC GCAGCGCCAA TAGCAACCGC GCCACGTTCT
GGGGCGTCAA GCGCGCCAGT CTCGGCGGGT AGCGGCAATT TTGTCGTACA GGTGGGCGCA
CTCAGCGATC AACAACGGGC GCAAACCTGG CTGAATAGCC TGCGCGAACG TTTCCGCGTT
CCGGGCAAAG CGACGTTCAA CAACGGACTG TACCGCATCC AGCTTGGCCC TTTCCCGAGC
CGTCAACAGG CCGTTGAACT GCAACAACGG CTATCGACCG AAGCACAGCA ACCCTCTTTT
GTCACTGTGG CGTCAAGTGC CCAGTAG
|
|---|
| Protein sequence | MRKDWLWMGA LSLVLAGCTS TDQQSQTPAS QTAYSGPVEE IPGVEPRYEP YNPASLQDYT
VNDKKYRIVK NPENFSEAGF ASWQNRGSAG TRTAIGEEFN PNAFAAAHPT LPIPSYVRVT
NLSNGRRLVV RVNDRGPYTP GRIIDLTRAA ADRLNLSNNT KVKVDFISVA PDGTLSGPGT
VGTRVARQSF ALPSRPDLGT SSLGTPTLST TTPEAAVRPI SNATLTPTAQ NSTSVDTSTI
PSSGNIPVSV SGSRGGGFLK SPQPLRSGVL EGSESAPAVS PAGATASVSN AAPIATAPRS
GASSAPVSAG SGNFVVQVGA LSDQQRAQTW LNSLRERFRV PGKATFNNGL YRIQLGPFPS
RQQAVELQQR LSTEAQQPSF VTVASSAQ
|
|---|
| |