Gene Dd703_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_1013 
Symbol 
ID8088135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp1158207 
End bp1161593 
Gene Length3387 bp 
Protein Length1128 aa 
Translation table11 
GC content54% 
IMG OID644835089 
Productpotassium efflux protein KefA 
Protein accessionYP_002986640 
Protein GI242238459 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGCC GGTCAGCTGT TTATCCTTTT TTACCTTTCT TCCCCACTTT TCGTTTGCCT 
GTTGATGTAT TGCATCGTGT TCTGCTGTTG TTTATCGTCG CGCTGAGCCT GACATGTCCC
ATGGCGACAT CTTTCGCCGC GGCCGGCGAC GTACCGACTC GGGCGGACAT TCAGGGCCGT
CTGGATACGT TGAACAAACA AAAGAATCCT ACCTCCGCCG ATAAGCTGAC CCAGCAGGAT
TTATCCCAGA CGCTGGATTT GCTGGACGCT ATCGATCGGG TTAAACAGGA AACCAACCAG
CTTCGCCAAC AGGCGGCACA GGCGCCGGCA AAGCTTAAGC AAGTTAATGA GGATCTGGTG
TCGATGACGG GGGCCGCGCC GACGTCATCG CAGTCGCTGG ATTCGCTGCC GCTCAAACAA
CTGGAAGCCC GACTGAACTC CACACTGGAC GATCTGCAGT CCGCGCAGGA AAACCTGTCG
ACATACAACA GCCAGCTTAT TTCCCTGCAA ACCCAGCCGG AAAGAGTACA AAGCGCGTTG
TATGCCGCGT CCCAACGCAG CCAACAGATT CGTAATCAAC TCAATGGGAT CGAACCCAAC
CGGGAGCCTT TGCGTCCTAG CCAGCAGACA TTGCTGCAGA CGGAGCAGGT GCTGGTCGGT
TTGCAAATGG AGCAACAGCG TAAAAGCCTG GAAGTGAATA CGACGCTGCA GGATCTGTTG
CAGAAGCAGC GGGACTATAC CGCAGCGCAG ATCAGCCAGT TGGAACATAT GGTGCAGACG
CTGCAAGGCG TCATCAATAA CAAACGTCTG ACCCTGTCGG AAAAAACCGC CAAGGAAGCG
CAGAACTCTG ATGAATTGCA GCGGATCCAG GAAAACCCGC TGGTCAAAGC GGAAATGGAT
GTGAACCATC AGCTCAGCCA ACGCCTGATT AAGGCGACGG AAGCCGGGAA TACGTTGGTG
CAGGAAAGTA TTCAGGTGAA AAATTGGCTG GATCGTGCGA CGCAGTCGGA GCGCAATCTG
AAAGAGCAAA TTACGGTGTT GAAAGGCAGT TTGCTGCTGT CGCGTATTTT GTATCAGCAG
CAACAAAATC TGCCGTCGGC CGATTTGCTC AGCGACATGA GTGAGCAGAT AGCCGATTTA
CGCCTTGAGC AGTTCACTAT CAATGAGCAG CGGGATTTGT TGTTCCGGGG GGATGAATAT
ATCCAGCAAC TATTGGCCCG CAATAGTAAT GTGCAGGTTA ATGAAGAAGT CACCGATGCG
TTGACGCAGA TTCTGGATAT GCGCCGCGAG TTGTTGGATC AGCTGAATAA ACAGCTTGGT
AATCAGTTGA TGTTGGCGAT CAATCTGCAA ATTAGCCGTC AACAGTTGAT GAGCGTTAAT
ACGTCATTAC AGCGAACGCT GACGCAACAG ATTTTTTGGG TGAGCAGCAA TAAACCGATG
GACTGGAGCT GGCTGAAAGA CTGGCCATCG GCCGCGAAGC AACAGTTCAA GACGTTTCAC
CTCAGCATCA AGGCGGAGCA ACTGTGGCAA GGGCTGGTGT CTTCCTTAGT GTTCATCATC
CCTGCGCTGC TGGTCGTCGG GGGGCTTTAC TGGCGACGAA AAACAATTGA TGGGTATATG
GCGAAACTGG CCGGCGACGT CGGGCAGCTT AAGCGCGACA GCCAGTTACA CACGCCGCAG
ACCATCCTGC TGGTGATGCT GCGTACATTG CCGGGCGCGT TGGTGATCCT GTGTCTGGGC
ATTTGGCTGC AGTGCACCGA CAGTCAAATC AGCAGCTTTG CCTGGCAACT GAGCCAGAAT
CTGGCGTTGT TCTGGTTGGT ATTTGGTCTG GCATGGTTCA GCCTGAGCCC TGGCGGATTG
TATGAACGTC ATTTCGATGT TCCCATTTCC CGTTGTTCTC ATTACCGCCG TCAGACGCTG
CGCCTGGGGG GCGCGTTGTT GCCGCTGATG TTCTGGGCCG TGTTGGGGGA TAAAGCGCCG
CAGTATCTGG TCGGAGATGT CATCGGCCAG ACTGTCGTGG CGTGTAATCT GCTGTTGCTG
ACGATTCTGG TGTTCCCGAT ATGCCGTGAT AGCTGGCGCG CTAAAGATCA CCATACGGCT
CGGTTGATGG TGGTGACGGT GCTGGCAGCC ATGCCGCTGT TTCTGATCGG ATTGATGCTC
AGTGGGTACT TTTATACGAC GCTGCGCCTG TCCAGTCGTT GGACCAACAG CCTTTACCTG
CTGATTGTCT GGAATATCGT GTATTTGACG ACGTTCCGCG GGTTAAGCGT CGCGGCCCGG
CGTTTGGCTT ACCGCCGCGC TATCGCTCGA CGCCAGAATA TGGTGAAAGA GGGGGCGGAA
GGCAGCGAGC CGGTGCCGGA CGCGCCGATG GCGTTGGAGG AAATCAGCCA ACAGTCGTTA
CGACTGGCGA CGCTGGCTCT GTTGCTGATT TTTTCGGGCG CACTTTATTG GATCTGGGCC
GATCTGGTCA CGGTATTCTC TTATCTCGAC AGCGTTACGC TGTGGCATTA CACCGTAGCG
GGTGCCAATG GCACCGTGCT GCAGCCTGTA ACGCTGAACA ATGTGCTGGT GGCGCTGGTG
ATTGGCGTGG TTGCCTATAT CATGACCCGC AACCTGCCTG GTTTGCTTGA AGTATTGGTA
CTCTCGCGGC TGCAATTGCG GCAGGGAACC TCATACGCCA TCACGACGAT TCTGACCTAC
TTGATTACCG CGGTGGGCGC CGTGTCGTCC CTCAGTTCGC TCGGTGTTTC GTGGGATAAA
CTGCAATGGT TGGTCGCCGC GTTGTCCGTG GGGTTAGGCT TCGGTTTGCA GGAGATTTTC
GCCAACTTTG TTTCCGGCCT GATTATTCTG TTCGAAAGAC CGGTGCGTAT TGGCGACACC
ATTACCATCG GGTCGTTTTC GGGTTCAGTC AGTAAAATCC GGATTCGCGC CACCACGATT
ACCGATTTTG ACCGAAAAGA AGTCATTATT CCGAACAAGG CATTCGTGAC TGAGCGCCTG
ATTAACTGGT CGCTGTCGGA TACCATCACC CGCGTATTGA TTCGTATCGG CGTGGCCTAT
GGTTCCGATC TGGACAAAGT GAAAGAGGTT CTGTTGCAGG CGGCGCGCGA AAACTCACGT
GTGATGACGG ATCCGGAGCC ACAGGTGTTT TTCCTGGCGT TCGGCGCCAG TTCGCTCGAT
CATGAATTGC GTCTGTATGT GCGGGAACTG CGAGACCGTA GTTATACCGT GGATGAACTC
AACCGCACGA TCGATCGCCT CTGCCGCGAA AACGGGATTG ATATCGCCTT CAATCAACTG
GAAGTGTACC TGCATAATTC ACAAGGTAGC GAAGTAAAAG AAGTGTCGCG CGTGTTGGCG
CAGGATGCGC CAGATAAACC GGAATAA
 
Protein sequence
MSRRSAVYPF LPFFPTFRLP VDVLHRVLLL FIVALSLTCP MATSFAAAGD VPTRADIQGR 
LDTLNKQKNP TSADKLTQQD LSQTLDLLDA IDRVKQETNQ LRQQAAQAPA KLKQVNEDLV
SMTGAAPTSS QSLDSLPLKQ LEARLNSTLD DLQSAQENLS TYNSQLISLQ TQPERVQSAL
YAASQRSQQI RNQLNGIEPN REPLRPSQQT LLQTEQVLVG LQMEQQRKSL EVNTTLQDLL
QKQRDYTAAQ ISQLEHMVQT LQGVINNKRL TLSEKTAKEA QNSDELQRIQ ENPLVKAEMD
VNHQLSQRLI KATEAGNTLV QESIQVKNWL DRATQSERNL KEQITVLKGS LLLSRILYQQ
QQNLPSADLL SDMSEQIADL RLEQFTINEQ RDLLFRGDEY IQQLLARNSN VQVNEEVTDA
LTQILDMRRE LLDQLNKQLG NQLMLAINLQ ISRQQLMSVN TSLQRTLTQQ IFWVSSNKPM
DWSWLKDWPS AAKQQFKTFH LSIKAEQLWQ GLVSSLVFII PALLVVGGLY WRRKTIDGYM
AKLAGDVGQL KRDSQLHTPQ TILLVMLRTL PGALVILCLG IWLQCTDSQI SSFAWQLSQN
LALFWLVFGL AWFSLSPGGL YERHFDVPIS RCSHYRRQTL RLGGALLPLM FWAVLGDKAP
QYLVGDVIGQ TVVACNLLLL TILVFPICRD SWRAKDHHTA RLMVVTVLAA MPLFLIGLML
SGYFYTTLRL SSRWTNSLYL LIVWNIVYLT TFRGLSVAAR RLAYRRAIAR RQNMVKEGAE
GSEPVPDAPM ALEEISQQSL RLATLALLLI FSGALYWIWA DLVTVFSYLD SVTLWHYTVA
GANGTVLQPV TLNNVLVALV IGVVAYIMTR NLPGLLEVLV LSRLQLRQGT SYAITTILTY
LITAVGAVSS LSSLGVSWDK LQWLVAALSV GLGFGLQEIF ANFVSGLIIL FERPVRIGDT
ITIGSFSGSV SKIRIRATTI TDFDRKEVII PNKAFVTERL INWSLSDTIT RVLIRIGVAY
GSDLDKVKEV LLQAARENSR VMTDPEPQVF FLAFGASSLD HELRLYVREL RDRSYTVDEL
NRTIDRLCRE NGIDIAFNQL EVYLHNSQGS EVKEVSRVLA QDAPDKPE