| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_1010 |
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| Symbol | |
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| ID | 8088132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | - |
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| Start bp | 1152821 |
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| End bp | 1155964 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644835086 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002986637 |
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| Protein GI | 242238456 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.407288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGT TTTTTATTGA TCGCCCCATT TTTGCATGGG TAATCGCCAT CATGGTGATG
CTGACGGGGA CATTGGCAAT TCTCAAATTG CCAATCGCAC AATACCCGAC CATCGCACCA
CCAGCGATAC AGATTACCGC AACCTATCCC GGTGCGGATG CAAAAACCTT GCAAGATACA
GTAACGCAGG TTATCGAACA AAACATGAGC GGTCTGGACA ACATGCTGTA TATGTCGTCC
AACAGCGACT CATCCGGTTC TGTTCAGATC ACCGTGACGT TCGATTCCAA GGCAAACCCT
GATATCGCTC AGGTTCAGGT GCAGAACAAA CTGCAGCTCG CCATGCCGCT GCTGCCGCAG
GAGGTTCAGC AACAAGGTAT CAGCGTACAG AAGTCCAGCA GTAGCTTCCT GATGGTGTTA
GGTTTTATCA GTAATGACAA AAACATGACC CAGCAAGATA TTGCGGACTA TGTCGGCTCC
AACATTAAAG ATCCGATTAG CCGCGTATTA GGCGTTGGCG ATACTCAGCT ATTTGGTGCC
CAGTACGCGA TGCGCGTATG GTTGGATCCG GATAAACTCA ATAACTATCA GTTGACCACT
GCTGATGTCG TTACCGCTAT CACGGTGCAG AACAACCAGA TCGCCGCTGG TCAGTTAGGG
GGAACACCGC CGGTTCCGGG CCAGAAAATG AATGCGTCCA TCATTGCCCA GACCCGCCTC
AATTCGCCCG AACAGTTCGG TAATATTTTG TTGAAGGTCA ATCAGGACGG CTCGCAAGTT
CGGCTCAAGA ATGTCGCTCG TATTGAGTTG GGCGGTGAAA GTTACAGCGT CGTCGCTCGA
TTTAACGGCC AACCGGCCGC TGGCCTGGGG ATTAGACTGG CAACCGGCGC CAACGCTCTG
GATACAGCGG CAGCTGTAAA AGCGGAAATC GCCAAGCTGG AACAGAATTT CCCTGAAGGG
ATGAAGGTCG TTTACCCTTA TGACACCACA CCATTCGTAA AAATTTCTAT TTATGAAGTG
TTGAAAACGT TGCTCGAAGC TATCGTGCTG GTGTTTGTGG TGATGTACCT GTTCCTGCAA
AACTTCCGCG CCACACTGAT TCCTACCATC GCGGTTCCAG TGGTTCTGCT CGGTACATTC
GCCATCCTCT CCGTATTTGG CTACTCGATA AATACCCTGA CCATGTTCGC CATGGTGCTC
GCCATCGGTC TGTTGGTGGA TGATGCCATC GTGGTCGTGG AAAACGTGGA GCGCGTGATG
GCTGAGGAGA AATTGTCTCC CAAAGAAGCC ACCCGCAAAT CCATGGGGCA AATCCAGGGA
GCGCTAGTCG GTATCGCGTT GGTGCTTTCG GCCGTGTTCG TTCCGATGGC ATTTTCCGGC
GGTTCTACCG GTGCGATTTA TCGTCAGTTC TCCGTAACCA TCGTATCGTC CATGGTTCTG
TCGGTACTGG TCGCGTTGAT TCTGACGCCG GCGCTCTGTG CAACTATTCT CAAACCTATT
GATCATCACG CCGAGAAGAA AGGCTTTTTT GGCTGGTTCA ACCGACTGTT TGACAAAAGC
ACTCATCATT ACACCAATAG CGTCGCCAAT ATCCTGCGAG CAACCGGACG TTATGTCGTG
GTTTATCTGT TCATCGTAGC CGGGCTGGCA GTGATGTTTA TGCGTCTGCC AAGTTCCTTC
CTGCCGCAGG AAGATCAGGG TGTCTTGCTG ACTATGGTGC AATTACCGGT AGGTTCGACA
CAGGAAAGCA CTCAAAAAGT TCTTGATCAG GTAAACGATT ACTACCTGAC TCATGAAAAA
GAGAATGTGA AATCGGTCTT TACAGTTAAT GGTTTCGGGT TTGCCGGTCG CGGGCAAAAC
ATGGGGATCG CATTCGCCAG CCTGAATGAT TGGGATGAAC GGAAAGGTGC TGCGAACAAG
GTCGATGCCA TTATCGGTCG TGCATTCGGC AACTTCTCAC AAATCAAGGA AGCGCTGGTT
ATCCCCTTCA ACATCCCTGC AATTATCGAA CTAGGTACCG CTAGCGGGTT CGACTTTGAG
CTGATCGACA AAAACAACCT CGGCCACGAT AAACTGATGG CTGCCCGTAA CCAACTATTG
GGAATGATTG CTCAACATCC GGATACGTTG GTTCGTGTAC GTCCCAATGG GATGGAAGAT
ACGCCTCAGT ACCGTCTGGA TATCGATCAG GAAAAAGCCG AAGCATTGGG GGTGTCTATC
TCCACAATCA ACTCGACGCT TTCTACCGCG TTGGGGGGCA GTTACGTCAA TGACTTCATT
GACCGGGGCC GTGTGAAGAG GGTTTACGTA CAAGCTGATG CGCCATTCCG TATGCTGCCG
AACGATATCC AGAAATGGTA CGTTCGCGGA ACCTCCGGCC AGATGGTGCC ATTTTCCGCC
TTTGCCTCCG CACACTGGGA ATATGGCTCT CCACGTCTGG AGCGCTATAA CGGCTTACCT
TCTGTGGAGT TGGTAGGGGA AGCAGCAGCA GGGAAAAGTA CCGGCGAAGC CATGGCATTG
ATGGAATCAC TGGCAACCCA ATTACCGCCG GGAGTCGGTT TTGACTGGAC GGGGATGTCC
TTCCAGGAGC GGCTGGCGGG CAACCAGGCT CCAGCCTTAA TCATTATCTC TGCGATAGTG
GTCTTCTTGT GTCTTGCTGC GCTGTATGAA AGTTGGTCTA TCCCCTTCTC TGTCATGCTG
GTGGTTCCAT TAGGGATCTT CGGGGCGGTA ATGGCAGCTA GCCTGCGCGG TCTTGAAAAC
GACGTGTACT TCAAAGTGGG GCTGTTAACC ACTATCGGTC TGTCGGCCAA GAACGCCATT
CTGATCGTCG AATTCGCCAA GGATTTGATG GAGAAAGAGA ACAAGGGCCT GATAGAGGCG
ACGCTTGAAG CAATACGCAT GCGTCTTCGC CCTATTTTGA TGACATCACT GGCGTTCATC
CTGGGCGTAG TGCCGCTGGT CATCAGCACG GGCGCTGGCT CCGGTGCTCA GAACGCAGTA
GGTACTGGCG TAATGGGCGG GATGATTACG GCAACGGTAC TGGCGATTTA TTTCGTCCCG
GTATTCTTTG TCGTTGTTCG CCAACGTTTT AGCCAGAAAA AAGACACCGC TCACACGTCT
GATAATTCAA CGGAAACTCA TTGA
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| Protein sequence | MAKFFIDRPI FAWVIAIMVM LTGTLAILKL PIAQYPTIAP PAIQITATYP GADAKTLQDT
VTQVIEQNMS GLDNMLYMSS NSDSSGSVQI TVTFDSKANP DIAQVQVQNK LQLAMPLLPQ
EVQQQGISVQ KSSSSFLMVL GFISNDKNMT QQDIADYVGS NIKDPISRVL GVGDTQLFGA
QYAMRVWLDP DKLNNYQLTT ADVVTAITVQ NNQIAAGQLG GTPPVPGQKM NASIIAQTRL
NSPEQFGNIL LKVNQDGSQV RLKNVARIEL GGESYSVVAR FNGQPAAGLG IRLATGANAL
DTAAAVKAEI AKLEQNFPEG MKVVYPYDTT PFVKISIYEV LKTLLEAIVL VFVVMYLFLQ
NFRATLIPTI AVPVVLLGTF AILSVFGYSI NTLTMFAMVL AIGLLVDDAI VVVENVERVM
AEEKLSPKEA TRKSMGQIQG ALVGIALVLS AVFVPMAFSG GSTGAIYRQF SVTIVSSMVL
SVLVALILTP ALCATILKPI DHHAEKKGFF GWFNRLFDKS THHYTNSVAN ILRATGRYVV
VYLFIVAGLA VMFMRLPSSF LPQEDQGVLL TMVQLPVGST QESTQKVLDQ VNDYYLTHEK
ENVKSVFTVN GFGFAGRGQN MGIAFASLND WDERKGAANK VDAIIGRAFG NFSQIKEALV
IPFNIPAIIE LGTASGFDFE LIDKNNLGHD KLMAARNQLL GMIAQHPDTL VRVRPNGMED
TPQYRLDIDQ EKAEALGVSI STINSTLSTA LGGSYVNDFI DRGRVKRVYV QADAPFRMLP
NDIQKWYVRG TSGQMVPFSA FASAHWEYGS PRLERYNGLP SVELVGEAAA GKSTGEAMAL
MESLATQLPP GVGFDWTGMS FQERLAGNQA PALIIISAIV VFLCLAALYE SWSIPFSVML
VVPLGIFGAV MAASLRGLEN DVYFKVGLLT TIGLSAKNAI LIVEFAKDLM EKENKGLIEA
TLEAIRMRLR PILMTSLAFI LGVVPLVIST GAGSGAQNAV GTGVMGGMIT ATVLAIYFVP
VFFVVVRQRF SQKKDTAHTS DNSTETH
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