| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0896 |
|---|
| Symbol | |
|---|
| ID | 8090037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 1025705 |
|---|
| End bp | 1026883 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644834970 |
|---|
| Product | glycine betaine transporter membrane protein |
|---|
| Protein accession | YP_002986526 |
|---|
| Protein GI | 242238345 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.652731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATA CGCAAAACCC AAACCTGAAC GAAACGCTGA GCGGGGATAC CACCCGCCAG
ACGGCGGATC CCTGGGCGAC GGTCGGCCAG CCGGCCGACG CATCCCCTGC ATCGGATCCT
TGGGCCACGG CGCCCGGTAG TGCGCCAACC TCGGTCGACC CGCTGCACAA TCCACCGTTG
CACAGCCCGC CAACCGCCGC CGATGCCCCG CCGCAGAGTG CGGACTGGCT GAATAACGCA
CCCGCTAACG TGGATACGGC GTTCAATCCG CTTGATCCAT TCCACCACAC ATTGGTGCCG
CTCGACCGTT GGGTCACAGA CGGGATCGAC TGGCTGGTGT TGCACTTTCG CCCGCTGTTT
CAGGGGATCC GGATGCCGGT GGACATGATT CTGAATGCCT TCCAACAGCT GCTGACCGGC
ATGCCGGCGC CCGTCGCCAT CCTGCTGTTT TCCTTGCTGG CCTGGCAGAT CGCCAGCGCC
GGCATGGGGG TGGCCACGTT GTTGGCGCTG ATCGTCATCG GCGCCATCGG CGCCTGGTCG
CAGGCGATGA TCACCCTATC GCTGGTGCTG ACCGCGCTAT TCTTCTGCCT GATCATCGGC
CTGCCATTGG GCGTTTGGCT ATCCCATAGC CAGCGCGCCG CCCGTGTGGT GCGGCCATTG
CTGGATGCCA TGCAAACCAC CCCGGCGTTC GTCTATCTGG TACCGATCGT CATGCTGTTC
GGTATCGGCA ACGTGCCCGG CGTGGTCGTC ACCATCATTT TCGCGCTGCC GCCGATCGTT
CGCCTGACCA TCCTCGGCAT TCGCCAGGTG CCGGCGGATT TGGTGGAAGC GGCGGAATCC
TTCGGCGCCA GCCCACGGCA GATGCTGTTC AAGGTGAAAC TGCCGCTGGC GATGCCCACC
ATCATGGCAG GCGTCAATCA GACGCTGATG CTGGCGCTGT CGATGGTGGT GATCGCGTCC
ATGATCGCCG TGGGAGGGCT GGGGCAGATG GTGCTGCGCG GCATCGGCCG GCTGGATATG
GGCCTGGCAT CCATCGGCGG CGTCGGCATC GTGGTGCTGG CCATCATTCT CGACCGGATC
ACGCAATCTC TGGGCCGAGA CGCCCGCAAC CGCGGCCCAC AGCGCTGGTA TATGCGCGGC
CCCGTCGGTT TGCTGGTGCG TCCGTTCGTC AAAGCCTGA
|
|---|
| Protein sequence | MADTQNPNLN ETLSGDTTRQ TADPWATVGQ PADASPASDP WATAPGSAPT SVDPLHNPPL
HSPPTAADAP PQSADWLNNA PANVDTAFNP LDPFHHTLVP LDRWVTDGID WLVLHFRPLF
QGIRMPVDMI LNAFQQLLTG MPAPVAILLF SLLAWQIASA GMGVATLLAL IVIGAIGAWS
QAMITLSLVL TALFFCLIIG LPLGVWLSHS QRAARVVRPL LDAMQTTPAF VYLVPIVMLF
GIGNVPGVVV TIIFALPPIV RLTILGIRQV PADLVEAAES FGASPRQMLF KVKLPLAMPT
IMAGVNQTLM LALSMVVIAS MIAVGGLGQM VLRGIGRLDM GLASIGGVGI VVLAIILDRI
TQSLGRDARN RGPQRWYMRG PVGLLVRPFV KA
|
|---|
| |