| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0735 |
|---|
| Symbol | |
|---|
| ID | 8088008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | - |
|---|
| Start bp | 840546 |
|---|
| End bp | 841739 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644834807 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_002986368 |
|---|
| Protein GI | 242238187 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.160604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCAGA ATGTCGACGC CTATGCCGGC GACCCTATCC TGTCCCTGAT GGAGAAATTC
AAACAGGACC CGCGTACCGA CAAGGTTAAC CTCAGCATCG GGCTGTATTA CGACGGGCAA
GGCGTCATTC CTCAGTTGCA GGCCGTTGCG GCCGCAGAAG CGCAAATGCA GGCCGAACCA
CAGCACGCCT CGGTCTATCT GCCGATGGAA GGGTTGCAAA GCTACCGCAA CGCGATCCAG
CACCTGCTCT TCGGTGAACA CCACCCGGCG CTGACCGCAG GGCGCATCGC CTCCATTCAG
ACGTTGGGCG GCTCCGGCGC GTTGAAAGTA GGGGCTGACT TCCTCAAACG TTATTTCCCG
GATTCCGAGG TATGGGTGAG CGACCCAACC TGGGAAAACC ACATTGCGAT TTTTGCCGGC
GCCGGTTTCA AGGTGCATAC CTATCCCTAT TTCGACGCCC AAACGCTGGG AGTGAATATC
GAAGGGATGA TCGACGCACT CCGGCAGTTG CCGGCGCGCG GCATCGTGCT GCTGCATCCG
TGCTGCCATA ACCCGACCGG CTCCGACTTG ACCCATGCCG AGTGGGATCG CGTCATTGAA
GTGCTGATTA GCCGCGAACT GATCCCATTC CTGGATATCG CCTACCAAGG CTTCGGCGGC
GGTATGGATG ATGATGCTTA TGCCATCCGC GCCATCGCTG GCTCAGGCTT ACCGGCATTG
GTCAGCAACT CGTTCTCCAA GATTTTCTCG CTGTATGGCG AGCGCGTTGG TGGGTTATCC
GTCGTGTGCG AAGACAGCGA TGCCGCCGCC CGCGTACTGG GCCAATTGAA GGCTACCGTG
CGCCGTAACT ACTCCAGCCC GCCGAACTTC GGGGCACAGA TTGTATCGCG GGTACTGAAC
GACGCGGCAC TCAACGCCAG TTGGAAAGCG GAAGTGGAAG CCATGCGAGT ACGCATCCAG
GAAATGCGCC AAACGCTGGT TAACACATTG AAAAAGGCCC TGCCGGAACG TGATTTCGAT
TACCTGCTGA CCCAGCGCGG CATGTTCAGC TATACCGGTT TCAGCCCGGA ACAGGTCGAT
CGCCTGCGTG AAGAGTTCGG CGTTTATCTG ATCGCCAGCG GTCGGGTTTG CATGGCAGGT
CTGAATCACG GCAACGTTCA GCGCGTCGCC GACGCTTTCG CTGCTGTACA GTAA
|
|---|
| Protein sequence | MFQNVDAYAG DPILSLMEKF KQDPRTDKVN LSIGLYYDGQ GVIPQLQAVA AAEAQMQAEP
QHASVYLPME GLQSYRNAIQ HLLFGEHHPA LTAGRIASIQ TLGGSGALKV GADFLKRYFP
DSEVWVSDPT WENHIAIFAG AGFKVHTYPY FDAQTLGVNI EGMIDALRQL PARGIVLLHP
CCHNPTGSDL THAEWDRVIE VLISRELIPF LDIAYQGFGG GMDDDAYAIR AIAGSGLPAL
VSNSFSKIFS LYGERVGGLS VVCEDSDAAA RVLGQLKATV RRNYSSPPNF GAQIVSRVLN
DAALNASWKA EVEAMRVRIQ EMRQTLVNTL KKALPERDFD YLLTQRGMFS YTGFSPEQVD
RLREEFGVYL IASGRVCMAG LNHGNVQRVA DAFAAVQ
|
|---|
| |