| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0590 |
|---|
| Symbol | |
|---|
| ID | 8088997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 664177 |
|---|
| End bp | 665127 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644834662 |
|---|
| Product | hydroxymethylbutenyl pyrophosphate reductase |
|---|
| Protein accession | YP_002986223 |
|---|
| Protein GI | 242238042 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0761] Penicillin tolerance protein |
|---|
| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCT TGCTGGCAAA CCCACGCGGG TTCTGCGCTG GCGTTGACCG CGCCATCAGT
ATTGTGGAAC GTGCGTTGGA GGTTTACGGC GCACCTATCT ATGTGCGTCA TGAAGTGGTG
CATAACCGCT ATGTGGTGGA TGGGCTGCGG GAACGCGGCG CCATTTTTAT TGAGCAGATC
GATGAAGTAC CGGACGGCGC GATTCTGATT TTTTCCGCCC ACGGCGTTTC TCAGGCGGTG
CGCGCGGAAG CACGTAATCG CGATCTGACG GTATTTGACG CCACTTGCCC ACTCGTCACC
AAGGTACATA TGGAAGTGGC GCGCGCCAGT CGAAAAGGTA TGGAAGCGAT TCTGATTGGC
CATGCCGGGC ACCCCGAGGT AGAAGGAACT ATGGGGCAGT ACAGCAATCC GAAAGGTGGC
ATGTATCTGG TCGAGGGGCC GGACGATGTC TGGTCACTGC AAGTGAAAAA TGAAACCAAT
TTGTGCTTCA TGACCCAGAC TACGCTGTCG GTGGACGATA CCTCGGCGGT GATTGATGCG
CTGCGGGCGC GTTTCCCGCA GATTATCGGG CCGCGCAAGG ATGATATCTG CTATGCCACG
ACCAATCGTC AGGAGGCGGT ACGCAATCTG GCCCAGGAGG CTGATGTGGT CTTGGTGGTC
GGGTCAAAAA ATTCGTCCAA CTCCAACCGG CTGGCAGAAC TGGCGCAGCG TGTCGGCAAG
CCGTCCTACC TCATTGATTC GGCAGATGAT ATTCAGGAGT CCTGGTTCAG TCGCACCGCG
TGCGTCGGTG TGACGGCCGG CGCATCAGCT CCCGATGTGT TGGTGCAGCA GGTCGTGAAA
CGGCTGCAAG GCATGGGCGG GCAGATTGCG TTGGAGATGC AGGGGCGCGA AGAGAGCATC
GTCTTTGAGG TGCCGAAAGA ATTGCGGGTT GAGGTTCGAC AGGTCGAATG A
|
|---|
| Protein sequence | MKILLANPRG FCAGVDRAIS IVERALEVYG APIYVRHEVV HNRYVVDGLR ERGAIFIEQI
DEVPDGAILI FSAHGVSQAV RAEARNRDLT VFDATCPLVT KVHMEVARAS RKGMEAILIG
HAGHPEVEGT MGQYSNPKGG MYLVEGPDDV WSLQVKNETN LCFMTQTTLS VDDTSAVIDA
LRARFPQIIG PRKDDICYAT TNRQEAVRNL AQEADVVLVV GSKNSSNSNR LAELAQRVGK
PSYLIDSADD IQESWFSRTA CVGVTAGASA PDVLVQQVVK RLQGMGGQIA LEMQGREESI
VFEVPKELRV EVRQVE
|
|---|
| |