| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0564 |
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| Symbol | |
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| ID | 8088971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 633844 |
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| End bp | 635775 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644834636 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_002986197 |
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| Protein GI | 242238016 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAAG TAGGATATTG GCGTTATATC GTTGCAGGGG TGTGTCTGGT CGGCGCGTCA
TGTCAGGTTT TTGCTGATTC TCTGGATGAG CAGCGTCAGC GCTATCAACA GATCAAACTT
GCGTGGGATA GTAATCAACT GGATGTGGTG TCTCAATTGA TGCCAACGCT GCGAGATTAC
CCGCTTTATC CTTATCTTGA GTATCGGGCT TTGACTCAGG ATGTTTCCCT ACTCAGCACT
GTGCAGGTTA AACAGTTTAT TGCTACGCAT CCGACCCTGC CTGCCGTTCG AACACTGAAT
AACAATTTTA TCAATGAGCT GGCGCGGCGT CAGGATTGGA GCGGGTTGTT GTCGTTCAGC
CCCGAGCAAC CTAAACCAGT TGCTGCGCGC TGTAATTATT TGTATGCGCG TCTGATGGTG
AACCAGCCCC AGGGCATTTG GGATCAAACC CGAGATATCT GGTTAACCGG TCGTTCCTTG
CCTCCTTCCT GCGACAAGCT GTTTACGGCC TGGCAGCAGA GTGGCGGAAT GACATCGATG
ATGGTTCTTG AGCGTATGCG TTTGGCCATG GGGGAAGGCA ATAGCGGTTT GGTGAGCCAT
CTGGCGAGAC AGCTTCCCCC TGATTACAAA ACGATTACCG ATGCTCTGTT GAGACTGCAA
AATACGTCGA CCAAGACGGT GGAGCGTTTT GCCCGCTCTG TTGGCCCGAC AGATTTCACC
CGTAAAGCCT TATTGGCCGC ATTTAGCCGT ATCGCCAGAC AAGATCCGGA TAGCGCCCGT
TCGTTGTTGC CCCAGTTGGT GAGATTGCAG CGGTTCGGCA GCCAGGATCG ACAGACAATG
GATGAGGATG TGGCATGGCG TTTTATGGGG ACTGACGTTT CGGATGAGCA GGCTCGGTGG
CGTGATGTCG TTATCGCAAA GAGCAAGTCA GCGCCATTAA TCGAACGGCG GGTGCGTCTT
GCATTGGGGC AAGACGATCA TCAGGGATTG TCGCAATGGT TGACCCGTTT GCCTGCCGAG
GTATTACAGA AAGACGAGTG GCGCTACTGG CGAGCGGTGC TGCTTATTGA GCAGGGACAG
CGTGAGGATG GCGAAAATCA ACTGCGGGAT TTGATGAAGC AGCGTGGTTT TTATCCGATG
GCGGCTGCAC AGCGGTTGAA TTTGAACTAT CCGTTGACAA CGGTTATTTC GGCCAGACCC
GATCGCTCCA TCGGGCAATT GCCGGAGATT GCCCGGATAC GCGAATTGAT GTACTGGCGG
CTGGAAAGTC TGGCTCGTTC TGAATGGGCG GGATTAGTCG CCAGCCGCGA TCGCCCCCAA
CAGGAAGCGT TGGCAAGATT TGCGTTTGAA CAACGTTGGT ATGATTTAAG CGTGCAGGCG
ACGATAGTTG CTAAGCTCTG GGATAACCTT GAAGAGCGTT TCCCTTTAGC GTGGAATGAC
GAGTTTCGCC AGGCGACGCA AGGTAAAGGG ATCAGTCAAA GTTATGCCAT GGCCATCGCC
CGGCAGGAAA GCGCCTGGAA TCCGCAGGCT CGCTCTAGTG TGGGTGCTGC TGGTTTAATG
CAACTGATGC CGGCTACAGC ACAACATACG GCGCAAATGT TTAATGTCAC TAGTTACAGC
GACAGTAGTC AATTACTCGA CCCTCAAATG AACATCCAGT TGGGCTCCAG CTATCTTGAA
TATGTTTATC AGTCATTCGG GCAAAACCGT ATTCTGGCTT CTGCTGCCTA TAATGCCGGG
CCTTCGCGGG TAAGTACCTG GTTGAAGAAT AGTGAGGGCC GCATAGACGC GGTGGCGTTT
GTTGAAAGTA TTCCGTTTTC GGAAACGCGC GGATATGTCA AGAATGTGCT GGCCTATGAC
GTTTTTTACC GCAATCTGTT GAGCCGTCCC ACCCAATTAA TGACCGACAG TGAGTGGCGT
CGACGCTATT AA
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| Protein sequence | MFKVGYWRYI VAGVCLVGAS CQVFADSLDE QRQRYQQIKL AWDSNQLDVV SQLMPTLRDY
PLYPYLEYRA LTQDVSLLST VQVKQFIATH PTLPAVRTLN NNFINELARR QDWSGLLSFS
PEQPKPVAAR CNYLYARLMV NQPQGIWDQT RDIWLTGRSL PPSCDKLFTA WQQSGGMTSM
MVLERMRLAM GEGNSGLVSH LARQLPPDYK TITDALLRLQ NTSTKTVERF ARSVGPTDFT
RKALLAAFSR IARQDPDSAR SLLPQLVRLQ RFGSQDRQTM DEDVAWRFMG TDVSDEQARW
RDVVIAKSKS APLIERRVRL ALGQDDHQGL SQWLTRLPAE VLQKDEWRYW RAVLLIEQGQ
REDGENQLRD LMKQRGFYPM AAAQRLNLNY PLTTVISARP DRSIGQLPEI ARIRELMYWR
LESLARSEWA GLVASRDRPQ QEALARFAFE QRWYDLSVQA TIVAKLWDNL EERFPLAWND
EFRQATQGKG ISQSYAMAIA RQESAWNPQA RSSVGAAGLM QLMPATAQHT AQMFNVTSYS
DSSQLLDPQM NIQLGSSYLE YVYQSFGQNR ILASAAYNAG PSRVSTWLKN SEGRIDAVAF
VESIPFSETR GYVKNVLAYD VFYRNLLSRP TQLMTDSEWR RRY
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