| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0411 |
|---|
| Symbol | rpsC |
|---|
| ID | 8088646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya dadantii Ech703 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012880 |
|---|
| Strand | + |
|---|
| Start bp | 453897 |
|---|
| End bp | 454598 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644834475 |
|---|
| Product | 30S ribosomal protein S3 |
|---|
| Protein accession | YP_002986046 |
|---|
| Protein GI | 242237865 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0092] Ribosomal protein S3 |
|---|
| TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0239377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCAGA AAGTACATCC TAATGGTATT CGCCTGGGTA TTGTCAAAAC TTGGAACTCT
ACCTGGTACG CAAATACCAA AGAATTCGCT GACAACCTGG ACAGCGATTT TAAAGTTCGT
CAATACCTGA ACAAGGAACT GGAGAAAGCC TCCGTTTCCC GTATCGTTAT CGAGCGTCCG
GCCAAAAGCA TTCGTGTGAC CATTCACACT GCTCGCCCGG GTATCGTTAT CGGTAAGAAA
GGTGAAGACG TTGAAAAACT GCGTAAAGGC GTAGCTGATA TCGCTGGTGT TCCGGCGCAG
ATCAACATCG CTGAAGTACG TAAGCCGGAA CTGGACGCCA AATTGGTTGC TGACAGTATC
TCTTCTCAGC TGGAACGTCG TGTCATGTTC CGTCGTGCGA TGAAGCGTGC TGTACAAAAT
GCCATGCGTC TGGGCGCCAA GGGTATCAAA GTTGAAGTTA GTGGCCGTCT GGGCGGCGCG
GAAATCGCTC GTACCGAATG GTATCGCGAA GGTCGTGTTC CGTTGCACAC CCTGCGCGCT
GACATTGACT ACAACACCTC CGAAGCGCAC ACCACTTATG GTGTTATCGG TGTGAAAGTG
TGGATCTTCA AAGGTGAGAT CCTGGGTGGT ATGGCTGCTG TTGAACAACC GGAAAAACCG
GCTGCTCAAC CGAAAAAGCA GCAGCGTAAA GGCCGCAAGT AA
|
|---|
| Protein sequence | MGQKVHPNGI RLGIVKTWNS TWYANTKEFA DNLDSDFKVR QYLNKELEKA SVSRIVIERP
AKSIRVTIHT ARPGIVIGKK GEDVEKLRKG VADIAGVPAQ INIAEVRKPE LDAKLVADSI
SSQLERRVMF RRAMKRAVQN AMRLGAKGIK VEVSGRLGGA EIARTEWYRE GRVPLHTLRA
DIDYNTSEAH TTYGVIGVKV WIFKGEILGG MAAVEQPEKP AAQPKKQQRK GRK
|
|---|
| |