Gene Dd703_0339 details

Gene Information

• Locus tag: Dd703_0339
• Symbol: aroB
• ID: 8088574
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 388566
• End bp: 389651
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644834405
• Product: 3-dehydroquinate synthase
• Protein accession: YP_002985976
• Protein GI: 242237795
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0337] 3-dehydroquinate synthetase
• TIGRFAM ID: [TIGR01357] 3-dehydroquinate synthase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAGAA TTACCGTCAC TCTTGGGGAG CGCAGCTACC CCATTACGAT AGCAGCCGGA 
CTCTTCCAGG AGCCGGGTTC TTTTATGCCG TTGAAAACCG GCGATCAGGC GATGCTGGTG 
ACGAATGAAA CACTGGCGCC TCTCTACCTG GATACTGTGC GCAGCGTGCT GGAAAAAGGC 
GGTATTCGCG TTGATCAGGT GATTCTGCCG GATGGCGAGC AGTACAAATC GCTGGCGGTT 
ATGGAACAGG TGTTTTCTGC GCTGCTGGAG AAGCCCCATG GTCGTGATAC TACTCTGATA 
GCGCTGGGTG GCGGCGTGAT TGGCGATCTT ACCGGCTTTG CTGCGGCCTG TTATCAGCGG 
GGCGTGCGTT TCATTCAGGT TCCCACGACA CTGTTGTCTC AGGTGGATTC CTCCGTCGGC 
GGCAAGACGG CGGTAAACCA TCCGCTGGGC AAAAATATGA TCGGCGCGTT CTATCAGCCT 
GCATCCGTCG TTATCGATAT CAACTGCCTA AAAACGTTGC CCGCTCGCGA GTTGTCTTCT 
GGTCTGGCGG AAGTCATCAA GTATGGGATT ATTCTCGATC GCGCTTTCTT TGAATGGCTG 
GAAGGGCATA TTGAAGAGGT GCGTGCGTTG AAGGAAGGGC CTTTGGCTTA CTGTATCCGT 
CGTTGTTGCG AACTGAAAGC TGACGTTGTC GCTGCGGATG AACGTGAATC TGGGCTGCGC 
GCATTGCTGA ATCTGGGCCA TACTTACGGG CATGCTATTG AAGCGGAAAT GGGTTATGGC 
AATTGGCTGC ACGGCGAAGC TGTCGCGGCG GGCATGATGA TGGCGTCCCA TACTGCGCAT 
CGGCTCGGTC AGTTTAGCGT CGAAGATATC GAACGTGTCG CCTCGTTGTT GCTGCGCGCG 
GGTCTACCGG TGACTGGGCC TGCGGAAATG GCGCCGGAAT CCTATCTTCC CCATATGATG 
AGAGATAAAA AAGTTCTGGC GGGCGAACTG CGTTTGGTGC TCCCTACGGC GATTGGACGG 
TCAGAAATGC GTGGCGGCGT GCCGCATGAG CTGGTTCTGG CGTCGATAGC AGATTGTCTC 
CCCTGA 

 

Protein sequence

MERITVTLGE RSYPITIAAG LFQEPGSFMP LKTGDQAMLV TNETLAPLYL DTVRSVLEKG 
GIRVDQVILP DGEQYKSLAV MEQVFSALLE KPHGRDTTLI ALGGGVIGDL TGFAAACYQR 
GVRFIQVPTT LLSQVDSSVG GKTAVNHPLG KNMIGAFYQP ASVVIDINCL KTLPARELSS 
GLAEVIKYGI ILDRAFFEWL EGHIEEVRAL KEGPLAYCIR RCCELKADVV AADERESGLR 
ALLNLGHTYG HAIEAEMGYG NWLHGEAVAA GMMMASHTAH RLGQFSVEDI ERVASLLLRA 
GLPVTGPAEM APESYLPHMM RDKKVLAGEL RLVLPTAIGR SEMRGGVPHE LVLASIADCL 
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