Gene Dd703_0242 details

Gene Information

• Locus tag: Dd703_0242
• ID: 8088477
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dickeya dadantii Ech703
• Kingdom: Bacteria
• Replicon accession: NC_012880
• Strand: +
• Start bp: 273050
• End bp: 274873
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 644834310
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_002985881
• Protein GI: 242237700
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTCTACGG CAGACGTGTT GAATCGGGAA GCGTTAGCGG CGCAAATATT GCGTGAAACC 
TTCGGTTATC AGCAATTTAG GCCGGGGCAA CAGGCGATTA TCCATGCCGC CGTCAGCGGA 
CGGGACTGCC TGGTGATTAT GCCTACCGGC GGCGGTAAAT CGCTGTGTTA TCAGATCCCC 
GCCCTGGTAT TGGATGGGCT TACGTTGGTG GTGTCGCCGC TGATTTCCCT GATGAAAGAC 
CAGGTGGATC AGCTACAAGC CTACGGCGTT TCGGCCGCTT GTCTTAATTC CACTCAGACC 
AGAGAACAGC AGATGGCGGT GATCGCCGGT TGCCGCAGCG GGCAGATTCG CCTGCTGTAT 
ATCGCACCGG AGCGCCTGAC CAACGAGGGT TTTCTTGAGC AATTCACCGG CTGGAATCCG 
TCGTTGATCG CCATTGATGA AGCGCACTGT ATCTCCCAGT GGGGGCATGA TTTTCGTCCG 
GAATACCGGG AGCTCGGTTA TATCAAGCAG CGTTTCCCAC AGTTACCGGT GGTAGCGCTG 
ACCGCCACTG CCGACGAAAC CACCCGCAAC GACATCATCC GTTTGCTGGG TTTGCGTGAT 
CCGCTGGTTC AGATCAGCAG CTTCGACCGT CCCAATATCC GCTATACGCT GGTGGAGAAA 
TTCAAACCGC TCGACCAGCT GTGGCTGTTC GTTCAAGGGC AGCGCGGCAA AAGCGGCATC 
ATTTACTGCA ACAGCCGGGC AAAAGTGGAA GATATCAGCG CCCGTCTGCA GAACCGTGGC 
CTGAGCGTAG GGGCTTATCA CGCCGGGCTG GATAACGAAC GGCGCGCGCA AGTACAGGAA 
GCATTTCTGC GTGATGACCT GCAGGTGGTG GTGGCGACCG TGGCGTTCGG CATGGGCATC 
AACAAACCCA ATGTCCGCTT TGTGGTGCAT TTCGATATTC CGCGCACTAT CGAGTCTTAC 
TATCAGGAAA CCGGTCGCGC CGGAAGGGAC GGGCTCGCTG CCGAAGCGGC GCTGTTTTAC 
GACCCGGCGG ATATGGCGTG GCTGCGCCGC TGTCTGGAAG AGAAACCGGC AAGCGCGCAG 
CTGGACATTG AGCGTCACAA ACTGAACGCC ATGGGCGCGT TTGCCGAAGC GCAGACCTGC 
CGCCGTCTGG TATTACTGAA TTATTTCGGT GAAAACCGCC AGCAACCTTG CGGCAACTGC 
GATATCTGTC TGGATCCGCC CAAGCGTTAC GATGGCCTGG TGGATGCGCA AAAAGCGCTG 
TCATGCGTGT ACCGCGCGGG GCAACGGTTC GGCATGGGAT ATATCGCCGA AGTGCTGCGT 
GGCGCCAATA ATCAGCGTAT CCGGGAGTTT GGTCACGATA AATTGCCGGT TTACGGTATC 
GGTAAAGACA AAACGCAGGA GCAGTGGATC AGCATTTTGC GCCAGCTGAT CCACCTGGGG 
TTGCTGACTC AGAATATCAT CCAGCACTCC GCCCTGCAGT TGACGGAGTC GGCCCGGCCG 
GTGCTGCGTG GTGAAGTGCC GCTGCAATTG GCGGTGCCGC GTACCATCAA CCTCAAGCCG 
CGCGCCAGCC AGAAATCCTA CGGCGGGAAC TACGACCGTA AGCTGTTCGC CAAGCTGCGT 
AAGCTGCGCA AGTCGATCGC CGACGAAGAC AATATTCCGC CTTATGTCGT GTTCAGCGAC 
GCCACGCTGC TGGAGATGGC GGAGGTGATG CCGGTGACAC CGGGTGAATT GTTGAATATC 
AACGGGGTGG GGCAGCGTAA GCTGGAGCGT TTTGGCGTAC CCTTTATGAC ACTGATTCGC 
GAACATCTCG ATAACGACGA ATAA 

 

Protein sequence

MSTADVLNRE ALAAQILRET FGYQQFRPGQ QAIIHAAVSG RDCLVIMPTG GGKSLCYQIP 
ALVLDGLTLV VSPLISLMKD QVDQLQAYGV SAACLNSTQT REQQMAVIAG CRSGQIRLLY 
IAPERLTNEG FLEQFTGWNP SLIAIDEAHC ISQWGHDFRP EYRELGYIKQ RFPQLPVVAL 
TATADETTRN DIIRLLGLRD PLVQISSFDR PNIRYTLVEK FKPLDQLWLF VQGQRGKSGI 
IYCNSRAKVE DISARLQNRG LSVGAYHAGL DNERRAQVQE AFLRDDLQVV VATVAFGMGI 
NKPNVRFVVH FDIPRTIESY YQETGRAGRD GLAAEAALFY DPADMAWLRR CLEEKPASAQ 
LDIERHKLNA MGAFAEAQTC RRLVLLNYFG ENRQQPCGNC DICLDPPKRY DGLVDAQKAL 
SCVYRAGQRF GMGYIAEVLR GANNQRIREF GHDKLPVYGI GKDKTQEQWI SILRQLIHLG 
LLTQNIIQHS ALQLTESARP VLRGEVPLQL AVPRTINLKP RASQKSYGGN YDRKLFAKLR 
KLRKSIADED NIPPYVVFSD ATLLEMAEVM PVTPGELLNI NGVGQRKLER FGVPFMTLIR 
EHLDNDE