| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd703_0079 |
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| Symbol | xylF |
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| ID | 8087500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya dadantii Ech703 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012880 |
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| Strand | + |
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| Start bp | 95013 |
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| End bp | 96011 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644834145 |
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| Product | D-xylose transporter subunit XylF |
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| Protein accession | YP_002985720 |
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| Protein GI | 242237539 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAG TGAAATACAT TTTGCTGTCA GTCTGTGCCG TTATCGCTAC GCTGGGTCAG
CCGGGATTCG CCAGAGAAGT GAAAATTGGT ATGGCGATCG ATGATTTAAG GCTTGAACGC
TGGCAAAAGG ATCGGGATAT TTTCGTGCAG AAAGCGGAAA CGCAAGGGGC GAAAGTGTTT
GTACAGTCCG CGAATGGCAA TGAGGAAACC CAGATATCGC AAATAGAAAA TATGATTAAT
CGCGGCGTCG ATGTGCTGGT TATTATTCCC TATAACGGCA AGGTCTTAAG CAATGTTATT
GCAGAGGCTA AACGCGAAGG AATAAAGGTA CTGGCTTATG ACCGTATGAT TAATAATGCG
GATATCGATT TTTATATTTC GTTTGATAAT GAGAAAGTAG GCGAATTACA GGCCCGATAT
CTGGTTGATA AAGTGCCTCA GGGAAATTAT TTTTTGATGG GCGGATCGCC GGTTGATAAT
AATGCCAAGC TGTTCCGCGA AGGGCAGATG AAAGTATTAA AACCGTTAAT TGATAACGGG
AAAATCAAAG TGGTTGGCGA CCAATGGGTG GACGCCTGGC TACCGGAAAA CGCCCTGAAG
ATCATGGAAA ACGCATTGAC GGCCAATAGC AATAAGGTCG ATGCCGTCGT GGCCTCGAAC
GACGCTACGG CCGGCGGCGC CATTCAAGCG TTGGCGGCGC AGGGGCTGGC GGGCAAGGTG
GCGATCTCCG GTCAGGATGC CGATCTGGCG GCCATTAAGC GAATCGTCGC AGGCACCCAG
ACCATGACGG TCTACAAACC CATTACCAAA CTGGCGCAGG ACGCCGCCGA TATCGCGATT
TCGCTGGGCG AGGGGAAAAC GCCTTCGTCG AACGCCACGC TGAATAACGG CAAGAAAGCC
GTTCCTTCCT TCCTGCTGAC GCCGATCCCC GTGGATAAGA ACAACATCGA CAGTACCGTA
GTCGCTGACG GTTTCCACAA AAAATCGGAT GTGTACTGA
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| Protein sequence | MMKVKYILLS VCAVIATLGQ PGFAREVKIG MAIDDLRLER WQKDRDIFVQ KAETQGAKVF
VQSANGNEET QISQIENMIN RGVDVLVIIP YNGKVLSNVI AEAKREGIKV LAYDRMINNA
DIDFYISFDN EKVGELQARY LVDKVPQGNY FLMGGSPVDN NAKLFREGQM KVLKPLIDNG
KIKVVGDQWV DAWLPENALK IMENALTANS NKVDAVVASN DATAGGAIQA LAAQGLAGKV
AISGQDADLA AIKRIVAGTQ TMTVYKPITK LAQDAADIAI SLGEGKTPSS NATLNNGKKA
VPSFLLTPIP VDKNNIDSTV VADGFHKKSD VY
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