Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_4215 |
Symbol | |
ID | 8117665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 4759953 |
End bp | 4760711 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644854592 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_003006487 |
Protein GI | 251791766 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTTT CTATTATCCG CGACAATTTG GGTTACCTGA TGTGGGGCAC CTTTCCGGAT GGACCATTGG GGGGAGCGGC GCTGACGCTG GTGCTTAGCC TGATGGCCGG GCTGACTTCG GCGGTACTCG GTACGGTACT GGGAGTGGCG CTGGCGATGC TGCGTGGCTG GGCGGGCGGG CTGCTGGCCT TGGTGCTTGG GTTTTTCCGG GCGATTCCGG TGATCATGTT GATTTTTTGG ACTTACTTCC TGCTGCCGAT GGTTTTTGGC GTCGATATTC CCGAAATCAC CACCGTGGTA TGCGCGTTGG CGCTGATCGC ATCCGCTTAT CTGGCGCACG GCGTGAAGGC GGGCATTGTG GCGATAGGCC GTGGCCAGTG GCAGGCCGGG ATGTCGCTGG GATTGGGACG CTGGCAGACG CTGTGGTACA TCGTACTGCC GCAAGCGTTG CGCATGATGG TGCCGTCGTT CATCAACCAG TGGATCTCCC TGATTAAAGA TACGTCGCTG GCTTACATTG TCGGCGTGGG TGAACTGACG TTTCTGGCGA CCCAGGTTAA CAACCGCAGT ATGGTTTATC CGACGGAAGT ATTTTTGTTC ATCGCGCTGG TCTATTTTAT CTTTTGCCTG TCGCTGGACC TGCTGGCGCA GGGCCTCAGC CGGCGTTTTC GCACCGGGCC GCAACCGACC CGGCATAGGC TATTCGGTCG GCGTCAGGCG GTACGCGTGC CGGAGTCGCC GTTACGAGAG TCCGCCTGA
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Protein sequence | MDFSIIRDNL GYLMWGTFPD GPLGGAALTL VLSLMAGLTS AVLGTVLGVA LAMLRGWAGG LLALVLGFFR AIPVIMLIFW TYFLLPMVFG VDIPEITTVV CALALIASAY LAHGVKAGIV AIGRGQWQAG MSLGLGRWQT LWYIVLPQAL RMMVPSFINQ WISLIKDTSL AYIVGVGELT FLATQVNNRS MVYPTEVFLF IALVYFIFCL SLDLLAQGLS RRFRTGPQPT RHRLFGRRQA VRVPESPLRE SA
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