| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4181 |
|---|
| Symbol | yieM |
|---|
| ID | 8117631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4724494 |
|---|
| End bp | 4725969 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644854561 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003006456 |
|---|
| Protein GI | 251791735 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.981735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACGC TGGAATCCCT GGAGATGCTG TTATCCCTCG ACGAAAACGA ACTGCTGGAT
GACGTGATTG TGGCTCTGAT GGCAACACCT CAACTGGTGA TGTTCTTCGA CAAGTACCCG
CGTCTGAAAA ATGCCGTGAT GCGTGATTTG CCGCAGTGGA AAGAAAACCT CCGGCAACAT
TTGCGCAGCA CCCAGGCCCC TCCAGAGCTG GAAAAAGAGT TCGTCTGTTA TCAGCAAACG
CAGTTGGTTA GCGATCGTAC CTTTCAATCC AGCCTGCCGG ACATTATGTC CACCTTGCAC
CATGTGGGCT CTCCTTTCCT GAGTCAGGCC GAAAAACTGG TCTGTTTCGC GTCACACTCG
TCGGAACATC CTATCAGCAG CAGCCAGCAC AGCTTATTCA TGCAGCGCTG GCGCCTTAGC
CTGACGATGC AAACCCTGAA TCTGCACCAG CAGATCATGG AGCAGGAGCG GGACCAATTG
CTGGACGAAA TCCAAAAACG CCTGACGATA AGCGGCGCGC TTGAACCCAT TCTCGCTGAA
AATGATACCG CCGCCGGCAG ACTGTGGGAT CTCAGCGCCA GCAAACGGAT GAAACAACCA
TTCCATGCGT TACTGGAAAC CGGTGCTTTT TTGCAACAAC AGCCGGAATT GCAACGCCTG
GCGGAACGCC TGGGTCGCAG CAGAGAAACG AAGTCGGTGC TTAGCCATGA TGCGCCTAAA
GAAACTTTTC AGATCATGGT ACGTGAACCG GCGTTTGCAC CGGAGCAAGT CAGCGGCATT
CATCAAAGCG ACGATATCCT CCGGCTACTG CCCACCGAGC TGTCTACCCT TGGGATCCGT
GAGCTGGAGT TCGAGTTTTA TCGTCGGTTG TCGGAACATC GGTTACTGAC TTACCGGCTG
CAAGGGGAAA GCTGGCGGGA AAAAACGCTT GAACGGCCGG TTGTCCATCA GCATAGCGAG
CAGCAACCGA GAGGGCCGTT TATCGTCTGC GTAGATACAT CGGGCTCAAT GGGCGGATTT
AACGAACGTT GCGCCAAAGC TTTCTGTCTG GCGCTGATGC GCATAGCCCT GGCGGACAAC
CGCCGCTGTT ACATCATGTT GTTTTCCACC GGTATCGTCA GTTATGACCT AACATCGCCA
GGCGGTCTGG AGGAAGTCGT TCGTTTTCTC AGCCAGACTT TCCGGGGCGG CACTGATCTC
GGCAGTTGTG TATCTGCGCT GCTGGAAAAA ATGGACAGTC AAGCCTGGCA GGATGCCGAT
GCCGTCATCA TTTCAGATTT TATCGCTCAA CGTCTGCCGG ATGAGCTGGT CAACGAAGTC
AAACGCCGCC AGCACCGGCT GCAACACCGT TTCCATGCCG TCGCCATGTC TGCGCACGGC
AAGCCCGGCA TTCTGCGCAT TTTCGATCAT ATCTGGCGCT TCGATACCGG GCTTAAAAGC
CGCCTGTTGC GGCGCTTTCA GACCGAAAAA GTCTAA
|
|---|
| Protein sequence | MLTLESLEML LSLDENELLD DVIVALMATP QLVMFFDKYP RLKNAVMRDL PQWKENLRQH
LRSTQAPPEL EKEFVCYQQT QLVSDRTFQS SLPDIMSTLH HVGSPFLSQA EKLVCFASHS
SEHPISSSQH SLFMQRWRLS LTMQTLNLHQ QIMEQERDQL LDEIQKRLTI SGALEPILAE
NDTAAGRLWD LSASKRMKQP FHALLETGAF LQQQPELQRL AERLGRSRET KSVLSHDAPK
ETFQIMVREP AFAPEQVSGI HQSDDILRLL PTELSTLGIR ELEFEFYRRL SEHRLLTYRL
QGESWREKTL ERPVVHQHSE QQPRGPFIVC VDTSGSMGGF NERCAKAFCL ALMRIALADN
RRCYIMLFST GIVSYDLTSP GGLEEVVRFL SQTFRGGTDL GSCVSALLEK MDSQAWQDAD
AVIISDFIAQ RLPDELVNEV KRRQHRLQHR FHAVAMSAHG KPGILRIFDH IWRFDTGLKS
RLLRRFQTEK V
|
|---|
| |