Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_4175 |
Symbol | |
ID | 8117625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4716913 |
End bp | 4717332 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644854555 |
Product | D-ribose pyranase |
Protein accession | YP_003006450 |
Protein GI | 251791729 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.228706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG GTGTGTTACT TAATTCCGAT ATCTCGTCGG TGATTTCCCA ACTGGGACAT ACCGACCAGA TTGTGATTGC CGATGCCGGT TTGCCGATTC CGGAAACCAC AAGCCGTATC GATTTGGCTT TGACCCATAA TGTACCTGGT TTTTTACAGG TGCTGGATGT GGTGACGGCG GAGATGCAGG TTGAGGCTGC AATTCTGGCT CAGGAAATCG TCGAGAAAAA TACGCCGCTC CATGACGCAT TACTAAAGCA GTTAGCACAA CTTGAACAAC ACCAGGGAAA TACCATTTCA CTGCATTACG TCAGCCACGA AGAGTTTAAA AAACAAACTG GCCAAAGCCG AGCCATTATT CGTACCGGGG AATGTTCTCC CTATGCGAAT GTGATTCTTT GTGCTGGCGT CACCTTCTGA
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Protein sequence | MKKGVLLNSD ISSVISQLGH TDQIVIADAG LPIPETTSRI DLALTHNVPG FLQVLDVVTA EMQVEAAILA QEIVEKNTPL HDALLKQLAQ LEQHQGNTIS LHYVSHEEFK KQTGQSRAII RTGECSPYAN VILCAGVTF
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