Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_4173 |
Symbol | rbsC |
ID | 8117623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | - |
Start bp | 4714424 |
End bp | 4715392 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644854553 |
Product | ribose ABC transporter permease protein |
Protein accession | YP_003006448 |
Protein GI | 251791727 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00211847 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCTC AAACTATCAC AGCAAAGCGC TGGCTCAGCA AAGAGTGGCT GATGGAGCAA AAATCATTGA TCGCCCTGCT GATTCTTATC GCTGTGGTGT CTTCGATGAG TCCCAACTTT TTTACCCTGA ACAACCTGTT CAATATCCTG CAGCAAACCT CAGTGAACGC CATTATGGCG GTGGGAATGA CGCTGGTTAT CCTCACCTCC GGTATCGATT TGTCGGTCGG GTCGTTGCTG GCGCTGACCG GCGCGGTAGC GGCGTCCATC GTCGGGCTTG AGATCAACGC TTTGGCGGCG GTATTCGCCG CACTGGCGTT GGGAGCCGTC ATCGGCGCAG GGACCGGCAT CATCGTTGCC AAAGGGCGGG TGCAAGCCTT TATTGCTACG CTGGTGATGA TGTTGCTGCT ACGTGGCGTG ACCATGGTGT ATACCAACGG TAGCCCAATC AACACCGGTT TTTCCGATGC GGCGGATGCG TTAGGTTGGT TCGGTATCGG GCGTCCTCTC GGCGTGCCTA CGCCAATCTG GATTATGGCC GTGGTATTCC TGGCAACCTG GTACATGCTG CACCATACCC GTATCGGTCG CTATATCTAT GCGCTGGGTG GTAATGAAGC GGCAACCCGC CTTTCGGGGA TCAGCGTCGA TAGAGTGAAA ATCGTCGTTT ATTCGTTGTG CGGTTTGTTG TCGGCTCTGG CAGGCATTAT TGAAGTGGCT CGTCTGTCTT CCGCGCAACC AACGGCGGGA ACGGGGTATG AACTGGATGC CATTGCGGCG GTAGTGCTGG GTGGTACAAG TTTGTCGGGT GGTAAAGGAC GCGTGGTGGG AACGTTAATC GGTGCCTTGA TTCTGGGCTT CCTGAATAAT GGGCTTAACC TGTTAGGTGT TTCTTCTTAC TACCAGATGA TCGTCAAGGC GGTGGTTATT CTGCTGGCGG TTTTGGTAGA TAACAAAGGC AGTAAATAA
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Protein sequence | MSSQTITAKR WLSKEWLMEQ KSLIALLILI AVVSSMSPNF FTLNNLFNIL QQTSVNAIMA VGMTLVILTS GIDLSVGSLL ALTGAVAASI VGLEINALAA VFAALALGAV IGAGTGIIVA KGRVQAFIAT LVMMLLLRGV TMVYTNGSPI NTGFSDAADA LGWFGIGRPL GVPTPIWIMA VVFLATWYML HHTRIGRYIY ALGGNEAATR LSGISVDRVK IVVYSLCGLL SALAGIIEVA RLSSAQPTAG TGYELDAIAA VVLGGTSLSG GKGRVVGTLI GALILGFLNN GLNLLGVSSY YQMIVKAVVI LLAVLVDNKG SK
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