| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4172 |
|---|
| Symbol | |
|---|
| ID | 8117622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | - |
|---|
| Start bp | 4713507 |
|---|
| End bp | 4714397 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644854552 |
|---|
| Product | D-ribose transporter subunit RbsB |
|---|
| Protein accession | YP_003006447 |
|---|
| Protein GI | 251791726 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000287299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTGA AGAAGATTGC TACTCTGGTT TCCGCTGTCG CGCTGAGTGC CACTGTCAGT
ACCAATGCGC TGGCGAAGGA TACTATTGCT CTTGTTGTTT CCACGCTGAA TAACCCGTTC
TTTGTGTCGC TGAAAGACGG CGCGCAAAAA GAAGCGGACA AATTGGGCTA CAACCTGGTC
GTGCTTGATT CCCAGAACAA CCCGGCTAAA GAGCTTTCCA ACGTGCAGGA TTTGACTGTA
CGCGGCACCA AACTGTTGCT GATCAACCCG GCGGATTCCA ACGCGGTAGG CAATGCGGTG
AAACTGGCTA ATCAGGCCAA AATTCCTGTT ATCACGCTGG ACCGTGTGGC CGCCAGCGGC
GAAGTCGTCA GTCACGTCGC TTCCGATAAC GCCTTCGGCG GTAAAGTCGC TGGTGATTTC
ATCGCTAAAA AATTGGGTGA AGGCACCAAA GTCATTCAAC TGGAAGGCCT GGCGGGTACT
TCTGCCGCTC GTGAGCGTGG CGCCGGCTTC ATGAAGTCTG CCGAGAAAAA CAAATTTAAC
ATGCTGGCGA GCCAGCCTGC TGATTTCGAT CGCACCAAGG GCTTGAACGT CATGCAAAAC
CTGCTGACGG CACATCCGGA TGTCAAAGCG GTATTCGCCC AGAACGACGA AATGGCGCTC
GGTGCGCTGC GTGCTCTGCA GACTGCCGGT CGTGACGATG TCATGGTGGT CGGTTTTGAT
GGCACCGCTG ATGGCGTGAA AGCGGTAGAA GGCGGAAAAC TGGCGGCTAC CGTGGCTCAG
CGTCCGGAGC AGATCGGTAT CATCGGTGTG GAAACGGCTG ACAAAGTGCT GAAAGGCGAA
AAAGTACAGC CGATCATCCC TGTTGACCTG AAACTGGTTG CCAAACAATA A
|
|---|
| Protein sequence | MNLKKIATLV SAVALSATVS TNALAKDTIA LVVSTLNNPF FVSLKDGAQK EADKLGYNLV
VLDSQNNPAK ELSNVQDLTV RGTKLLLINP ADSNAVGNAV KLANQAKIPV ITLDRVAASG
EVVSHVASDN AFGGKVAGDF IAKKLGEGTK VIQLEGLAGT SAARERGAGF MKSAEKNKFN
MLASQPADFD RTKGLNVMQN LLTAHPDVKA VFAQNDEMAL GALRALQTAG RDDVMVVGFD
GTADGVKAVE GGKLAATVAQ RPEQIGIIGV ETADKVLKGE KVQPIIPVDL KLVAKQ
|
|---|
| |