| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4076 |
|---|
| Symbol | |
|---|
| ID | 8120928 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4598358 |
|---|
| End bp | 4599383 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644854453 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003006353 |
|---|
| Protein GI | 251791632 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3943] Virulence protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATA ACACACCTCA AGCGCCACAA GGTGAGTTTG TTCTCTTCAC CAGTGCTGAC
GGTCAAACCC GCGTTGAGTG TCGTTTTGAG TCCGATATGT TGTGGCTTTC TCAAGCCACG
ATAGCTGAGT TATATGGCAA AGCGAAAGCG ACCATCAGTG AGCATATAAA AAATATATTT
ACTGAAGGTG AATTGGACGA AAATTCAGTT GTTCGGTTAT ACCGAACAAC TGCGGCAGAC
GGCAAATCAT ACAATGTTCA ATACTTTAGC CTGCCATTAG TATTAGCAGT TGGTTATCGA
GTCCGTTCAA GCCGTGGCAC TCAGTTTCGT CAATGGGCAA CCCAAACTTT ACAAGAGTAT
TTGATCAAAG GCTTCGTCAT GAATGACGAG CGTCTGAAAA ATCCGCCCGT TGGTCATTCC
GCTGTGCCAG ATTACTTTGA TGAAATGCTG GAACGCATTC GCGATATCCG AGCCAGTGAG
CGACGTGTTT ATCTGCGGGT GAAAGAAATC TTTACTATGG CCGCCGACTA CGAGCCATCC
AACCAGGAGA CTAACCGTTT CTTTCAAACC ATCCAAAACA AGTTGCATTA TGCCTGCACG
CATATGACGG CCGCTGAGCT TATCGCCAGC CGTGTAGATG CAAGTAAACC GGATATGGGC
CTGACCAGCT ATAAAGGCAA TGAAGTACGC AAGACAGACG TCACTATTGC AAAGAACTAC
CTGCATGAAG ACGAAATCAA AGAGCTCAAT CGTATCGTCA ATATGTGGCT CGATTTTGCC
GAAGACCAAG CTTTACGCCG CAAGCAGGTA TTCTTGCAGG ACTGGGCCGA TAAGCTTGAC
CAGTTCTTAA GTTTTAACGA TCGGGATGTT TTAAGCGGTG CCGGGAACAT CGCCAAAAAA
GACGCAGATG ATAAGGCAAA AGTGGAGTTT GAGCGCTTTG CAGCACAGCG CCGTCGCTTA
AAAGAAGCCG AAGGCGCACA AGCCAATATA GCTGCACTCA AGGCAATACT TAAAAAGGAC
AAATAA
|
|---|
| Protein sequence | MADNTPQAPQ GEFVLFTSAD GQTRVECRFE SDMLWLSQAT IAELYGKAKA TISEHIKNIF
TEGELDENSV VRLYRTTAAD GKSYNVQYFS LPLVLAVGYR VRSSRGTQFR QWATQTLQEY
LIKGFVMNDE RLKNPPVGHS AVPDYFDEML ERIRDIRASE RRVYLRVKEI FTMAADYEPS
NQETNRFFQT IQNKLHYACT HMTAAELIAS RVDASKPDMG LTSYKGNEVR KTDVTIAKNY
LHEDEIKELN RIVNMWLDFA EDQALRRKQV FLQDWADKLD QFLSFNDRDV LSGAGNIAKK
DADDKAKVEF ERFAAQRRRL KEAEGAQANI AALKAILKKD K
|
|---|
| |