| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_4001 |
|---|
| Symbol | |
|---|
| ID | 8119600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dickeya zeae Ech1591 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012912 |
|---|
| Strand | + |
|---|
| Start bp | 4519018 |
|---|
| End bp | 4519860 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644854380 |
|---|
| Product | AntA/AntB antirepressor domain protein |
|---|
| Protein accession | YP_003006280 |
|---|
| Protein GI | 251791559 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3561] Phage anti-repressor protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAA AAAACAATGA CCTTCATGGT CAGGGGGTCG CTCACCCTGA AAACCGCCAG
AGTGATATTT CCAGTAATGG CTTTGCCGAA TTAATCCCGG TGATTTCTGG CCGGATAGGC
GAACGCGAAA CCAATATTGT GAGCGCCAAA TCCCTGCATA TTGCGTTAGG GGTGGGGCGT
GATTTCTCCA CCTGGATTAA AAGCCGTATT GAAGAATATG GCTTTATCGA CAATGTTGAT
TTTTTGACCT TTGATTCCCC CATTCCGGTG AATCAATACA CTGAAAACGG CCAGCTAGCC
CGGCAATGGA AAACAAGCCG GGGTGGTGAT CGCCGCAGTA AAGATTATGT GCTGTCACTT
AACATGGCAA AAGAACTGGC AATGGTTGAG CGCAACGAGC AGGGCCGTGC CGTTCGTCGT
TACTTCATCC AGTGCGAGGA AGCCTTACAC CGCAATGTGC CGGAAGTGGC CGCCCGTTTT
CGCCGCCAGC TCAAAGCCCG CCTGACCGCC GCGAATTACT TCAAACCGAT GTGCGCCGCA
CTGGAAACCG CCCGTTCTGA GTTGGGCAAG AAAACCCTGC CCCACCACTA CACCACCGAA
AGCAACATGA TCGCCCGCCT GGTACTGGGT GGCCTGACGG CAAAAGACTG GGCGCAGGTC
AATGGTGTAA CCGGCGAACC CCGCGACAGC ATGAGCGCCG ACCAACTGGA GCACCTTTCC
TACCTTGAGC AGACCAACAT CACGCTGATT GAACTGGGGC AGGACTACCC CCAACGCAAA
GCCGAATTAA CCCGGCTGTC TCAACGCTGG ATGGCAAAAC GACTGGGGGT GAACCATGCG
TAA
|
|---|
| Protein sequence | MTSKNNDLHG QGVAHPENRQ SDISSNGFAE LIPVISGRIG ERETNIVSAK SLHIALGVGR
DFSTWIKSRI EEYGFIDNVD FLTFDSPIPV NQYTENGQLA RQWKTSRGGD RRSKDYVLSL
NMAKELAMVE RNEQGRAVRR YFIQCEEALH RNVPEVAARF RRQLKARLTA ANYFKPMCAA
LETARSELGK KTLPHHYTTE SNMIARLVLG GLTAKDWAQV NGVTGEPRDS MSADQLEHLS
YLEQTNITLI ELGQDYPQRK AELTRLSQRW MAKRLGVNHA
|
|---|
| |