Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_3971 |
Symbol | |
ID | 8117576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 4489567 |
End bp | 4491123 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644854350 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003006250 |
Protein GI | 251791529 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGT TACTATCCGC AGTAACTTCA CGCCGTTCCG CCGTCGCTCT TGGGCTGTCA TTGTGTCTGG CCGCTGCGGC TCAGGCGCAG GATCTGCGCA TTTCCATCTA TGCCGACATC ACCGGGCTGG ACCCGCACGA CACCTCGGAT ACCCTGAGCT ACTCCATCCA GAGCGGGATC TTCGAGCGGC TGTTCCAGTT CGACAACCAG ATGAAACTGG TGCCGCGGCT GGCTACCGGC TACACCGGCA ACGCCGACGC CACCGAGTTC ACCATCACGC TGCGCGAAGG CATCACCTTT CAGGACGGCA CGCCGTTCAA CGCCGAGGCG GTAAAAGCCA ACCTTGACCG TCTGGCCGAC CAGACCAAAG GGCTCAAGCG CAACAGCCTG TTCAATATGA TCAAGAACGT GACGGTGGTG TCGCCGACGC AGGTCAAAAT CGAGCTGAAT AAATCGTTCG GCGCTTTTGT CAACACGCTG GCGCACCCGT CGGCGGTGAT GCACAGCCCG ACGGCGCTGA AACAGTACCC GGACGAAACC CAACTGCGCG TGCATCCGGT CGGCACCGGT CCGTTCAAGT TCACCGAATG GCAGCAGGGT AAAGACGTCA AGCTGGTGAA ATACGATAAC TACTGGCAGA AAGGCTGGCC GAAAGTCGAC AGCGTCACCT TCTACCCGTC GCCGGAAGAC GCCACCCGCG TCGCGGCGCT GAAATCCGGC CAGTCCGACG CTATCTACCC GCTGCCGTCC GATCTGATCA AAACCGTTGA AGACGACGCC AAGCTGGCTA TCCAGCGCGA CCCGAGCATC TATCTGTTTT ATATGGCCAT CAATACCCAG CACGGCCCGC TGAGCGATGT ACGGGTACGT CAGGCGCTGA ACTACGCCAT CAACCGCACC ATCTGGCTGA AAGTCGGCTT CGCCGGCATG GGCCTGCCTG CCGCGTCGGT CATGGCGCCG CGCGTGCAGT TCTTCGCCAG CCAGAGCGAA CCGAACTACA GCTACAGCCC GGCCAAAGCG AAAGAGTTGT TGAAAGAAGC CGGTTATGAG AACGGGCTGG AGCTGAAACT GTGGACCACC AACCGCACGG ACTATATCCG CAGCGCCCAG TTCTTCAAGC AGCAGTTGGA GCAGGTCGGC ATCAAAGTCA CCGTCACCCC GATGGACTCC GGCGCACGCA ACGAAAAACT GTTCGGCGTG AAAGACCCGA AACAGGCCGA GTTCGACCTG TACTACGGCG GCTGGTCGCC TTCCACCGGT GATGCCGACT GGGCGCTGCG CCCGCTGTTC GCCACCGAAT CCTGGGTGCC GAAAGCCTAC AACGTCTCTT ACTACAGCAA CCCGGATGTG GACAAAGCCA TCATGGCCGG CCTGGCGACC CCGGATAGCG ACAAACGCGC CGCCGCGTAT GCCGATGCTC AGAAACTTAT CTGGAAAGAC GCGCCGATGG TGTTCCTGGG CGTGCCGGAC AACCTGGTGG GTAAAGTGAA GAATCTGTCC GGCGTTTACA TGCTGGCGGA CGGTTCGCTG ATCTTCGATC AGGCTGAGTT CAAGTAA
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Protein sequence | MKPLLSAVTS RRSAVALGLS LCLAAAAQAQ DLRISIYADI TGLDPHDTSD TLSYSIQSGI FERLFQFDNQ MKLVPRLATG YTGNADATEF TITLREGITF QDGTPFNAEA VKANLDRLAD QTKGLKRNSL FNMIKNVTVV SPTQVKIELN KSFGAFVNTL AHPSAVMHSP TALKQYPDET QLRVHPVGTG PFKFTEWQQG KDVKLVKYDN YWQKGWPKVD SVTFYPSPED ATRVAALKSG QSDAIYPLPS DLIKTVEDDA KLAIQRDPSI YLFYMAINTQ HGPLSDVRVR QALNYAINRT IWLKVGFAGM GLPAASVMAP RVQFFASQSE PNYSYSPAKA KELLKEAGYE NGLELKLWTT NRTDYIRSAQ FFKQQLEQVG IKVTVTPMDS GARNEKLFGV KDPKQAEFDL YYGGWSPSTG DADWALRPLF ATESWVPKAY NVSYYSNPDV DKAIMAGLAT PDSDKRAAAY ADAQKLIWKD APMVFLGVPD NLVGKVKNLS GVYMLADGSL IFDQAEFK
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